- Transcript 'KH2012:KH.C11.334.v1...' >
- EST 'BW407562' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C2.618.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S216.g05543.01.t
Possible name(s)
CALM2; TNNC1; TNNC2
Gene model
Location
S216 [78,840 / 80,976]
Amino acid sequence
Length: 162
>Phmamm.CG.MTP2014.S216.g05543.01.p
MSLPEQLKDECTAAFEIFTNESPDGKLGPEELGKVLRMLGQSPSEDEVAEIIRDFAEGDN
MALDEFLDFMARQLNGNQDKREEDLSNSFKTLLKETFRWYDKDGDGIISWDELKIALQST
GEKVEDWEVEELMREGDENADKRIDFDEWINMMKELDGHITC
Nucleotide sequence
Length: 489
>Phmamm.CG.MTP2014.S216.g05543.01.t
ATGTCTCTTCCAGAACAGCTCAAAGACGAATGCACTGCTGCGTTTGAGATCTTCACCAAC
GAGAGTCCGGACGGCAAACTTGGCCCCGAAGAGCTTGGAAAAGTTTTGAGAATGTTGGGT
CAGAGTCCAAGTGAAGACGAAGTGGCTGAGATTATAAGAGACTTTGCCGAAGGCGACAAC
ATGGCTTTGGACGAGTTTCTTGACTTCATGGCAAGGCAGCTTAATGGAAACCAGGATAAG
CGTGAAGAGGACTTGAGCAACAGCTTTAAGACTTTGTTGAAAGAAACTTTCCGTTGGTAC
GACAAAGACGGTGACGGTATCATCAGTTGGGACGAATTAAAAATCGCGCTACAGAGCACC
GGTGAAAAGGTCGAAGATTGGGAAGTAGAGGAACTGATGCGTGAAGGAGACGAAAATGCT
GACAAGAGAATCGATTTTGACGAATGGATCAACATGATGAAAGAGCTTGATGGACATATT
ACTTGCTGA
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[3-160] 1.75E-33 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[24-42] 6.926 - T[88-123] 13.035 - T[128-159] 10.385 |
| SMART |
EF_hand_dom (IPR002048) - T[92-120] 0.017 - T[128-156] 2.1E-4 |
| CDD |
EF_hand_dom (IPR002048) - T[93-154] 3.34549E-15 |
| Pfam |
EF_hand_dom (IPR002048) - T[93-154] 1.0E-10 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[101-113] . - T[137-149] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CALM1_HUMAN | 36.943 % | 94.4 | 2.63E-25 |
| TNNC1_HUMAN | 44.516 % | 117 | 3.2E-34 |
| TNNC2_HUMAN | 39.61 % | 100 | 1.8E-27 |