- Clone 'cijv032m16' >
- Transcript 'KH2012:KH.C2.118.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S217.g05559.01.t
Possible name(s)
DYSF; FER1L6; OTOF
Gene model
Location
S217 [116,934 / 126,447]
Amino acid sequence
Length: 709
>Phmamm.CG.MTP2014.S217.g05559.01.p
MKQNGVGTTTTDVIVNIDTNNPALPPSGMTEVDLEDKENKSKEDEEDPMDEAALDWWSKY
FASLETLNEEKMKQEDDNIHDLYSEQDDGGPPDPNNGPEAPNGSKNVEQESNGKEKRVGK
KLLKGAVGAVRQAKKSLAAPVRKRKQKKLPIDELKIYDTELENVSEYSGFNDLLNSFDLF
RGKREDQADEITDQKRIVGTFKGAFKIYRYPLPHYIEQPDPQYGMFKGLPSNDPIHVLVR
VYIIRATDLHPTDPNGKADPYVVITLGNEKMNDKENYISKQLNPIFGKTFDFEATFPMES
ALTVQVFDWDLLSADDLIGETKIDLENRFYSKHRALCGIAEKYSIFGYNQWRDPMKPSEI
LKKQCKDLKVDGPHFSPGKVRVGKKVFSGPIELEDENGHKKPSDEHVALVALRHWDEIRK
VGCHLVPEHVETRSLYSPEKPGIEQGRLELWIDMFPMDMPLPGLPVDVSPRKPRGWLLGD
DKQETDIHYRSLTGEGNFNWRFIFPFDYLIAEEKIVVTKKESMFSWDETEFKMPPRLNLQ
VWDADHFSADDFLGSLTLDLTRMPRGAKSANKCSLNLASEEEDSSDVPMVSLFKQRRIKG
WWPFTAKNNEDELEITGKLEAEITLMTAEEAEKNPAGLARDEPDPLEKPNRPDTSFVWFM
NPLKSLRYLICARFKWLIIKVFILLLLIALLVLFIYSSPSWLMKKILGA
Nucleotide sequence
Length: 2,130
>Phmamm.CG.MTP2014.S217.g05559.01.t
ATGAAGCAGAACGGTGTCGGCACCACCACCACTGACGTCATAGTCAATATTGACACCAAT
AACCCTGCTCTGCCACCTAGCGGCATGACCGAAGTCGATTTGGAGGACAAAGAAAACAAG
TCAAAAGAAGACGAAGAAGACCCGATGGACGAAGCCGCACTTGATTGGTGGTCAAAGTAT
TTTGCCTCACTGGAAACTCTTAACGAGGAAAAGATGAAACAAGAGGACGACAACATCCAT
GATCTTTACAGTGAGCAGGATGACGGTGGTCCTCCTGATCCTAACAACGGACCGGAGGCT
CCAAACGGGAGTAAAAATGTCGAACAAGAGAGCAATGGCAAGGAGAAGAGGGTTGGAAAG
AAGCTATTGAAGGGAGCAGTCGGTGCAGTACGGCAAGCCAAGAAGAGTTTGGCAGCTCCT
GTGCGGAAAAGAAAGCAGAAGAAATTGCCGATAGACGAACTAAAGATCTATGACACGGAA
CTGGAAAACGTTTCCGAATATTCGGGTTTCAACGACCTTCTCAATTCCTTTGACCTCTTC
CGTGGCAAACGTGAAGACCAAGCTGACGAAATTACCGATCAGAAAAGGATTGTGGGAACT
TTCAAGGGCGCCTTCAAAATTTATCGCTACCCTCTTCCCCACTACATCGAACAACCAGAC
CCTCAGTATGGAATGTTTAAGGGCCTTCCATCGAACGATCCCATTCACGTGTTAGTTCGT
GTTTACATTATCCGAGCAACCGACCTCCATCCAACTGATCCAAACGGTAAAGCCGATCCC
TATGTTGTCATTACTCTTGGCAACGAAAAGATGAACGACAAAGAAAACTACATTTCCAAG
CAACTCAACCCGATCTTTGGAAAAACATTCGACTTCGAAGCAACATTTCCAATGGAAAGT
GCATTGACAGTTCAAGTTTTCGACTGGGATTTGCTGAGCGCCGACGACTTGATCGGAGAA
ACAAAGATTGATTTGGAAAATCGCTTCTACAGCAAACACAGAGCGTTGTGTGGAATAGCT
GAGAAATATTCCATTTTCGGTTACAACCAGTGGCGAGATCCCATGAAACCTTCCGAGATA
CTAAAGAAGCAATGCAAGGATTTGAAAGTGGATGGTCCCCATTTCTCACCAGGCAAAGTT
CGAGTTGGCAAAAAGGTCTTCTCTGGTCCCATAGAACTGGAAGATGAAAATGGCCATAAG
AAGCCGTCAGATGAACACGTGGCTCTGGTTGCATTACGTCACTGGGACGAAATTCGCAAA
GTCGGTTGCCACTTGGTTCCTGAGCATGTCGAAACCAGATCGTTGTACAGTCCTGAAAAA
CCAGGAATCGAACAGGGTCGGTTGGAACTGTGGATCGACATGTTCCCTATGGACATGCCC
CTTCCTGGTCTTCCTGTTGATGTCTCACCCAGAAAGCCAAGGGGGTGGTTGCTAGGCGAC
GATAAACAAGAGACTGATATTCATTACCGGTCACTTACTGGAGAAGGCAACTTTAACTGG
AGGTTCATTTTCCCGTTCGACTATCTCATCGCCGAAGAAAAGATCGTAGTCACCAAAAAG
GAATCAATGTTTTCATGGGACGAAACAGAATTCAAAATGCCTCCCAGATTAAACCTGCAA
GTGTGGGACGCGGATCACTTTTCTGCTGATGACTTTCTGGGTTCGCTGACCCTTGACCTT
ACACGCATGCCACGTGGAGCTAAGTCGGCAAACAAATGCAGTTTGAACCTTGCATCGGAG
GAAGAAGACAGTTCCGATGTTCCGATGGTGTCTCTCTTTAAACAACGCCGAATCAAAGGC
TGGTGGCCGTTTACTGCGAAAAACAACGAAGATGAACTGGAAATTACGGGAAAACTCGAG
GCTGAAATCACACTCATGACAGCAGAAGAGGCGGAGAAGAATCCAGCTGGACTTGCCAGA
GATGAACCAGATCCATTGGAGAAACCAAATCGCCCTGATACATCCTTCGTTTGGTTCATG
AATCCACTGAAGTCGTTGCGTTATCTTATCTGCGCCCGATTCAAGTGGCTCATCATAAAA
GTCTTCATTCTCCTCCTTCTCATTGCTCTTCTGGTTCTTTTCATCTACTCCTCACCAAGT
TGGCTCATGAAGAAAATTCTCGGAGCCTAA
| PANTHER |
Ferlin (IPR037721) - T[11-474] 2.3E-297 - T[474-708] 2.3E-297 |
| PANTHER |
Otoferlin (IPR029996) - T[11-474] 2.3E-297 - T[474-708] 2.3E-297 |
| SMART |
C2_dom (IPR000008) - T[238-337] 1.9E-14 |
| Gene3D |
C2_domain_sf (IPR035892) - T[238-347] 3.6E-25 - T[468-611] 6.5E-14 |
| CDD |
C2E_Ferlin (IPR037724) - T[238-361] 2.72718E-71 |
| Pfam |
C2_dom (IPR000008) - T[239-327] 8.0E-20 - T[524-569] 7.7E-4 |
| ProSiteProfiles |
C2_dom (IPR000008) - T[239-322] 15.074 |
| PRINTS |
C2_dom (IPR000008) - T[254-266] 9.4E-7 - T[280-293] 9.4E-7 - T[302-310] 9.4E-7 |
| CDD |
C2F_Ferlin (IPR037725) - T[474-575] 1.34713E-59 |
| Pfam |
Ferlin_C (IPR032362) - T[616-706] 2.5E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| OTOF_HUMAN | 59.11 % | 805 | 0 |
| FR1L6_HUMAN | 52.151 % | 591 | 0 |
| FR1L4_HUMAN | 40.756 % | 488 | 9.85E-154 |