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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S219.g05591.02.t

Possible name(s)

RPL23A

Gene model

Phmamm.CG.MTP2014.S219.g05591

Location

S219 [173,405 / 176,348]

Sequences

Amino acid sequence

Length: 119

>Phmamm.CG.MTP2014.S219.g05591.02.p
APKGASAKEKALKAKKAVLKGLHSHRKKKFRKTVHFRRPRTQKLPRAPKYPRRSVVRQSK
MDQFAIVKHPLTTESAMKKIEDNNTLVFIVDLKSNKPQIKQAVKKLYDIDVAKVNTLIR

Nucleotide sequence

Length: 360

>Phmamm.CG.MTP2014.S219.g05591.02.t
GGCGCCGAAGGGAGCATCCGCAAAAGAGAAGGCATTAAAGGCCAAGAAGGCCGTCCTTAA
GGGACTTCACTCGCACAGGAAGAAGAAGTTTAGGAAGACGGTCCACTTCCGTCGTCCCAG
GACACAGAAACTTCCTCGTGCACCAAAATATCCAAGAAGGAGTGTTGTTCGCCAGAGCAA
GATGGATCAATTTGCGATCGTGAAGCACCCATTGACCACAGAAAGTGCCATGAAAAAAAT
TGAGGACAATAACACGCTTGTTTTCATTGTTGACCTCAAGTCAAACAAGCCTCAAATTAA
ACAAGCAGTGAAAAAGTTGTATGACATCGATGTCGCCAAAGTCAACACCCTCATCAGGCC

InterProScan

Pfam
Ribosomal_L23/L25_N (IPR005633) - T[7-55] 2.6E-20
Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[28-119] 3.2E-42
SUPERFAMILY
Ribosomal_L23/L15e_core_dom_sf (IPR012678) - T[64-119] 3.38E-20
Pfam
Ribosomal_L25/23 (IPR013025) - T[66-118] 2.4E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL23A_HUMAN 74.747 % 150 9.29E-48