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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  2. Transcript 'Boschl.CG.Botznik201...' > 
  3. Region 'REG00001425' > 
  4. Region 'REG00001426' > 
  5. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S221.g05626.02.t

Possible name(s)

AL139300.1; CLUH; KLC4

Gene model

Phmamm.CG.MTP2014.S221.g05626

Location

S221 [101,346 / 116,829]

Sequences

Amino acid sequence

Length: 1,090

>Phmamm.CG.MTP2014.S221.g05626.02.p
MPGCKDRVLSPLHPVPKEPTKNNLCVKVLSMSVWNPPPGNRKLHGDLFYLYAVTMEQKRF
HITASHRGFYVNQSDMENFNPKPAQGTHQCHSLIDLLGQISPVFKRNFSTLNKKRFSRHP
FERIATPFQVYSWCAPVMDHHVDHVRAEDAFSSRLLLEEHIPGQQTRDWNEELAATRELP
RNSLPERLLRERAMFKVHSDFVAAATRGAMMVVDGNVMAINPGDARNMRMYIWNNVFFSL
GFDVRDHYKDFGGNHAAFYAPCADLAGVKAYNTLDIEGLHTLGTVVVDYRGYRVTAQSII
PGILEREQEQSVVYGSIDFGKTAQTHAKYTELLSKTTKALHVLPHHIQCGDEDKSVELHS
SLECKGIIGNDQRHYILDLLKTFPPDVNFLPMDDEPLPQECTQLGFPQPHRHRLATLRPE
LVESYVDHLFFTNLSAKTEIISTKPNSFAYLLLTVEDEKKFLEEIAKNESNQMTQWQQEA
VKSGSRLVGSCSETEFDIRFNPDVFTSVGSRSSEEETKLQKQMIKDAAAFLVSRQIPTFI
KDCLEHTTLPSDGSSLTDALHERGIGVRYIGKIVQLLSDTPSLQHIQRIGVMEIILRSTK
HIMRAYLQSVDQSSVSSAVSHFFNCFLGSWSTPVPTLPEEELISNKKKKKARKQRAQSGG
TTAPGTSPWHALTPEIMWAQIRQEALEYYAFTISPEDGVDELTEKHGIQKMSLLRRFCIM
MGIQVQVRDYLLDNRHKPAFSDEDILNLYPVVKHSAPKASDGFQFYTTAQAKVQQGYLKE
GLELFTEALNLFNNVYGAVHGEIAACYRHIARLNYMMSEHAEAISNQQKAAILSERMFGI
DHVTAISDHVSLALYCFAQRKISAALKLLYRARYLLLGVHGYDHPEVALLDSNIGLVLHG
VQEYDLSLRFLDEALKINIKYHGEGSLKAALSHHLVARAHSCKGEFRQALNHEKETYKLY
KTQLGDDHDKTKESGECLRHLTQQAVTLQRTMNEIYKNGSTASIPPLQITPPNMHSVLDL
MNVINGIIFIPLSQKDLEAIRSEVQRQQTENSKLVALATKNAPAVATPTDGPPNGSGEKA
AMQEVEVDLD

Nucleotide sequence

Length: 3,273

>Phmamm.CG.MTP2014.S221.g05626.02.t
ATGCCCGGCTGTAAAGATCGTGTTTTGTCACCTTTGCATCCAGTACCTAAAGAGCCAACC
AAGAACAACCTATGCGTAAAAGTTTTGTCAATGAGCGTTTGGAATCCTCCGCCCGGCAAT
CGCAAGTTGCACGGCGATCTTTTCTATCTTTATGCTGTCACAATGGAACAGAAGCGATTC
CACATCACAGCAAGTCATAGAGGATTTTACGTAAACCAAAGCGACATGGAGAATTTTAAC
CCGAAACCAGCCCAGGGAACCCACCAATGTCATTCTCTTATCGATCTTCTCGGACAAATT
TCTCCAGTTTTCAAACGAAACTTTTCTACTTTGAACAAAAAGCGGTTTAGTCGACATCCG
TTCGAAAGAATCGCTACTCCTTTCCAGGTTTATTCTTGGTGCGCACCGGTCATGGATCAC
CACGTTGATCACGTACGAGCCGAAGACGCGTTCAGTTCTCGACTTTTACTCGAGGAGCAC
ATTCCTGGACAGCAAACTCGAGATTGGAACGAGGAGTTGGCAGCAACGCGAGAACTTCCT
CGAAATTCTTTACCTGAAAGATTATTGAGGGAAAGAGCAATGTTTAAGGTGCACAGTGAC
TTCGTAGCAGCTGCCACTAGAGGTGCTATGATGGTTGTCGATGGCAACGTGATGGCGATC
AATCCTGGGGATGCCCGGAACATGAGAATGTACATCTGGAACAACGTCTTCTTTAGCCTT
GGCTTCGACGTTCGCGATCACTACAAAGATTTTGGCGGGAACCACGCTGCGTTTTATGCT
CCATGTGCCGATCTGGCGGGTGTCAAAGCTTACAACACCCTCGATATAGAGGGATTACAT
ACACTGGGAACAGTTGTGGTGGATTATAGAGGCTACAGGGTGACTGCCCAGTCCATTATA
CCAGGTATTCTGGAACGCGAACAGGAGCAGAGTGTGGTGTATGGCTCCATCGACTTCGGC
AAGACAGCACAGACGCACGCAAAGTACACAGAACTTTTGTCGAAAACCACCAAAGCCCTC
CATGTGCTTCCACATCACATACAATGCGGAGACGAAGATAAATCCGTGGAACTTCATTCG
TCACTCGAATGTAAAGGAATTATTGGCAACGACCAACGTCACTACATACTTGACCTTCTG
AAGACCTTCCCACCGGATGTAAACTTCCTACCCATGGACGACGAACCCCTGCCCCAGGAA
TGCACCCAACTGGGATTTCCCCAACCCCACAGACACAGACTGGCAACTTTGCGACCAGAA
TTGGTTGAATCATATGTTGATCACCTTTTTTTTACCAACCTGAGTGCCAAAACTGAAATT
ATTTCCACGAAACCAAACTCATTCGCCTATTTGCTTCTCACAGTTGAAGATGAGAAAAAG
TTTCTTGAAGAAATTGCAAAGAACGAATCGAACCAAATGACGCAATGGCAGCAGGAGGCG
GTGAAATCGGGGTCACGGTTGGTCGGTTCGTGTTCGGAAACGGAATTCGATATCCGGTTC
AACCCGGATGTTTTCACTTCCGTCGGAAGCAGAAGTTCGGAAGAGGAGACAAAACTCCAG
AAGCAGATGATTAAAGATGCTGCAGCTTTTCTTGTGTCAAGACAAATTCCAACCTTCATC
AAGGACTGCTTGGAGCACACAACCTTACCATCAGATGGGTCGTCGCTCACTGATGCTTTA
CATGAGAGGGGGATAGGAGTGAGATACATCGGAAAAATCGTCCAACTTCTATCTGATACA
CCTTCACTTCAACATATTCAGAGGATCGGTGTCATGGAGATCATACTGCGGTCAACCAAG
CATATCATGCGTGCATACCTTCAGTCGGTTGACCAGTCAAGCGTGTCATCAGCTGTTTCT
CATTTTTTCAATTGTTTTCTGGGAAGTTGGTCAACTCCTGTTCCTACTTTGCCTGAGGAG
GAACTTATAAGCAACAAAAAGAAGAAAAAGGCGCGAAAACAGCGCGCGCAATCTGGGGGT
ACAACCGCCCCCGGTACTTCCCCTTGGCACGCGCTCACCCCCGAAATAATGTGGGCCCAG
ATCCGCCAGGAGGCGCTCGAGTATTACGCGTTCACAATTTCGCCGGAAGATGGCGTCGAC
GAGTTGACTGAGAAGCACGGCATACAGAAGATGTCGCTGTTGCGCCGCTTCTGCATTATG
ATGGGAATTCAGGTGCAAGTTCGCGATTATTTGCTGGACAACCGCCACAAACCTGCTTTC
AGTGATGAAGACATTCTTAACCTTTACCCTGTAGTGAAACACAGCGCACCAAAAGCTAGC
GACGGTTTCCAATTCTATACAACAGCTCAAGCCAAAGTGCAACAAGGGTACCTGAAGGAA
GGATTGGAGCTTTTCACTGAAGCTTTGAACTTGTTCAACAATGTGTACGGTGCCGTACAT
GGAGAGATTGCAGCATGTTACCGACATATTGCAAGACTCAACTATATGATGTCGGAACAT
GCTGAAGCGATCAGCAATCAACAGAAAGCCGCGATCTTGAGCGAGAGAATGTTCGGTATT
GATCACGTGACGGCAATCAGTGATCACGTGAGCCTGGCACTTTATTGTTTCGCCCAGCGC
AAGATCTCTGCCGCCCTCAAGCTGTTGTATCGTGCCCGCTACTTGTTGCTAGGCGTCCAT
GGTTACGATCATCCGGAAGTCGCATTGCTGGATAGCAACATTGGTTTGGTTCTACACGGG
GTACAAGAATATGATCTCTCACTTCGATTCCTTGATGAGGCTCTTAAGATCAACATCAAG
TATCACGGAGAGGGGAGCTTAAAGGCTGCGTTGAGTCATCACTTGGTGGCGCGCGCCCAC
TCTTGCAAAGGGGAATTCCGTCAGGCGCTTAACCATGAGAAGGAAACTTACAAACTTTAC
AAAACCCAACTTGGAGACGATCATGACAAGACTAAGGAGAGTGGAGAATGTCTACGTCAC
CTCACACAACAAGCTGTCACCCTGCAGAGGACGATGAATGAGATTTACAAAAACGGTTCA
ACTGCGTCAATTCCGCCGCTACAGATAACTCCACCCAACATGCACAGCGTACTCGACCTC
ATGAATGTTATCAATGGCATCATATTTATTCCCCTCAGCCAAAAAGATTTAGAGGCGATC
AGATCAGAAGTTCAACGTCAGCAAACCGAGAACAGCAAGTTGGTTGCCTTGGCAACGAAG
AACGCGCCGGCGGTCGCCACTCCCACCGATGGCCCCCCGAACGGTAGCGGGGAGAAAGCC
GCCATGCAAGAAGTTGAAGTGGACCTCGACTGA

InterProScan

ProSiteProfiles
CLU_dom (IPR025697) - T[146-390] 47.71
Pfam
CLU_dom (IPR025697) - T[168-389] 8.1E-82
Pfam
CLU-central (IPR033646) - T[548-730] 1.0E-50
CDD
CLU-central (IPR033646) - T[550-730] 1.33015E-44
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[764-873] 1.75E-8 - T[849-961] 1.9E-10
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[764-1002] 2.9E-27

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CLU_HUMAN 56.46 % 1274 0