- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S224.g05660.01.t
Possible name(s)
ZFP36; ZFP36L1; ZFP36L2
Gene model
Location
S224 [41,339 / 43,066]
Amino acid sequence
Length: 390
>Phmamm.CG.MTP2014.S224.g05660.01.p
MSSTMVSSNIGFNEFQSDYAAIRSSFHDLQRSAALDKADFASNASFAVGFSNRTALARRH
SSSVFGASVVKPLAATITSTFRDTSGAHVGNGLLETVAEERFRSRAYSEGSNLSCDQQQQ
QQAQTTSRYKTELCRPFEENGRCKYGDKCQFAHGKHELRHMVRHPKYKTELCRTYHTSGL
CMYGPRCHFIHNTDELAPVSRQNSVSGIGLQTHQVSVPVTISNVIQQKRPTNLQLLSQQQ
QRNINQMNNAFPYPTANKVNTSPIGTPPGFFGPAEQPPLLSPVSPISATRTGPVFSFAKA
PMSPMDLQGATKTFGGFDVENRQATPPLTRFDVMQGGHQYMDLSNEDAVFDPPTPPDSDR
ESESGSPQAGGILNNSPQRLPIFRCLSQSE
Nucleotide sequence
Length: 1,173
>Phmamm.CG.MTP2014.S224.g05660.01.t
ATGTCGTCTACTATGGTTTCATCCAACATTGGCTTCAATGAGTTTCAATCAGACTATGCG
GCTATCCGCAGCAGCTTTCATGACTTGCAGAGAAGTGCAGCCCTGGACAAGGCTGACTTT
GCGTCAAACGCTTCCTTTGCTGTTGGATTTTCAAACCGTACGGCACTAGCTCGCCGCCAC
TCTTCGTCGGTCTTTGGCGCATCGGTAGTTAAACCTTTGGCAGCCACGATAACTTCCACA
TTCCGCGATACCAGTGGAGCTCATGTCGGCAATGGATTACTTGAGACTGTAGCTGAGGAG
CGCTTTCGCAGCCGAGCATACAGCGAAGGCTCAAACCTTAGCTGCGACCAGCAACAGCAG
CAGCAAGCACAAACCACCAGTCGCTACAAGACGGAGCTTTGTCGTCCATTCGAAGAAAAC
GGCCGATGCAAGTACGGTGACAAGTGCCAGTTTGCTCACGGCAAGCATGAGCTTAGGCAT
ATGGTCAGGCATCCCAAGTACAAAACCGAACTGTGTCGGACCTACCACACAAGCGGCTTG
TGTATGTACGGTCCACGATGTCATTTCATTCACAATACTGACGAGTTGGCTCCTGTTTCC
CGCCAGAATTCTGTCAGTGGCATTGGTTTGCAAACACATCAGGTCTCGGTTCCAGTTACG
ATTTCGAATGTCATTCAACAGAAGAGACCTACAAACCTACAGCTGCTTTCACAACAACAA
CAGCGCAACATCAATCAAATGAACAACGCCTTTCCATATCCGACGGCCAACAAAGTCAAT
ACTAGCCCGATTGGCACGCCGCCCGGCTTCTTTGGTCCCGCTGAGCAGCCGCCATTGCTG
TCCCCGGTGTCGCCAATATCCGCTACGCGCACAGGCCCGGTGTTCAGCTTCGCTAAAGCG
CCAATGTCGCCGATGGACCTCCAGGGCGCCACCAAGACTTTTGGTGGTTTCGATGTGGAG
AATCGTCAGGCAACACCACCGTTAACAAGGTTTGATGTTATGCAAGGAGGACATCAATAC
ATGGATTTGTCAAATGAGGATGCTGTTTTCGACCCACCAACGCCTCCGGATTCGGATCGC
GAATCTGAATCAGGCTCCCCACAAGCTGGTGGCATTCTAAACAATTCGCCGCAGCGCCTT
CCGATTTTCAGGTGCCTTTCGCAATCGGAATAA
| SUPERFAMILY |
Znf_CCCH_sf (IPR036855) - T[125-160] 2.49E-10 - T[162-197] 2.49E-10 |
| ProSiteProfiles |
Znf_CCCH (IPR000571) - T[128-156] 17.413 - T[166-194] 14.436 |
| SMART |
Znf_CCCH (IPR000571) - T[128-155] 1.5E-9 - T[166-193] 2.9E-7 |
| Pfam |
Znf_CCCH (IPR000571) - T[129-155] 7.7E-11 - T[167-192] 1.4E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TISB_HUMAN | 69.697 % | 152 | 4.92E-43 |
| TISD_HUMAN | 55.303 % | 144 | 1.21E-38 |
| TTP_HUMAN | 58.763 % | 112 | 3.09E-28 |