- Transcript 'KH2012:KH.L170.28.v1...' >
- Transcript 'KH2012:KH.L18.18.v2....' >
- Transcript 'KH2012:KH.C7.55.v3.A...' >
- Transcript 'KH2012:KH.C2.338.v3....' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S2274.g16471.01.t
Possible name(s)
EDIL3; F5; MFGE8
Gene model
Location
S2274 [6,339 / 18,772]
Amino acid sequence
Length: 488
>Phmamm.CG.MTP2014.S2274.g16471.01.p
MLKEIALLLALAALCNGCGCGCGCGGGGQCSDGKKGGNDFSKINIQANKDGLCKVGLKTY
YIPDSAITASSYWRPDLDHRHAPKWSRLYQAFIPGVSVGSWSAATNNADQWIQVDLREAK
TITGVITQGRNSHDQWVTEYKVSYLAADLTWKTVNDNSGTVMTDVDVTVEAAVNVKVVMA
KRIDCLCKWGLKTHYISDGAITASSYYGPNLNDCHAPKWSRLYQAMVPDVSVGAWAAGAN
NANQWIQVALDGATTITGVVTQGRNSYDQWVTEYKVSYLAADLTWKTVNANSGTAIADVD
VDVEVSVVIGVMAKRVGDNEFSKINIQANRDCLCKLGLKTHYIPDSAITASSYWHPEGTE
LHSTKWSRLDQAFIPGVSVGSWAAAANNLYQWIEVTLGKATTITGVITQGRDSLDQWVTE
YKVSYLAADLTWKTVNDESRFTKLFSGNSDRKSPVTNMFYKPITAHKIRILPTQWHGHIS
LRHEYLTC
Nucleotide sequence
Length: 1,467
>Phmamm.CG.MTP2014.S2274.g16471.01.t
ATGTTGAAAGAAATTGCTCTTCTGCTCGCCCTCGCAGCCTTATGCAACGGATGTGGGTGT
GGATGTGGCTGTGGAGGCGGAGGTCAATGTAGTGATGGCAAAAAAGGTGGCAACGATTTC
AGCAAGATCAATATCCAGGCTAATAAAGATGGTTTGTGCAAGGTGGGACTTAAGACCTAT
TACATTCCCGACAGTGCTATTACAGCATCGTCTTACTGGAGACCAGATCTTGACCATCGA
CATGCTCCAAAGTGGTCAAGACTTTATCAAGCTTTTATTCCTGGTGTTTCGGTTGGATCG
TGGTCAGCTGCGACAAATAATGCTGATCAATGGATTCAAGTAGATTTAAGAGAAGCTAAA
ACAATCACTGGGGTCATTACTCAGGGACGGAACAGCCATGACCAGTGGGTGACAGAATAC
AAGGTCTCGTATTTGGCTGCCGATCTGACATGGAAAACTGTGAACGACAATTCAGGAACA
GTAATGACAGATGTGGATGTAACTGTGGAGGCGGCGGTCAATGTAAAAGTGGTGATGGCA
AAAAGAATAGATTGTTTGTGCAAGTGGGGTCTTAAAACCCATTACATTTCCGACGGTGCT
ATTACAGCATCGTCTTATTATGGGCCAAATTTAAACGATTGCCATGCTCCCAAGTGGTCA
AGACTTTATCAAGCTATGGTTCCTGACGTTTCGGTTGGAGCGTGGGCAGCTGGAGCAAAT
AATGCTAATCAATGGATTCAAGTAGCCCTAGATGGAGCTACTACAATCACTGGCGTCGTT
ACTCAGGGACGAAATAGCTATGACCAGTGGGTGACAGAATACAAGGTCTCGTATTTGGCT
GCCGATCTGACATGGAAAACTGTGAACGCAAATTCGGGAACAGCAATAGCGGATGTGGAT
GTGGATGTGGAAGTCAGTGTTGTGATCGGTGTGATGGCCAAAAGGGTTGGAGACAACGAG
TTTAGCAAGATCAATATCCAGGCCAATAGAGATTGTTTGTGCAAGTTGGGACTGAAGACC
CATTACATTCCCGACAGTGCTATAACAGCATCGTCTTATTGGCATCCTGAAGGGACCGAG
CTACATAGCACAAAGTGGTCAAGACTTGATCAAGCGTTTATTCCCGGTGTTTCAGTTGGA
TCGTGGGCAGCGGCAGCAAATAATCTTTATCAATGGATTGAAGTAACCTTAGGAAAAGCT
ACAACGATCACTGGGGTCATTACCCAGGGGCGAGACAGTCTTGATCAGTGGGTGACAGAA
TACAAGGTCTCGTATTTGGCTGCTGATCTGACATGGAAAACTGTGAACGACGAATCGCGA
TTCACAAAACTCTTCAGTGGCAACAGCGACCGGAAAAGCCCAGTTACCAACATGTTCTAC
AAACCAATCACTGCCCACAAAATTCGAATTCTTCCCACACAGTGGCACGGCCATATCTCA
CTGCGCCACGAATACTTGACCTGTTAA
| ProSiteProfiles |
FA58C (IPR000421) - T[50-166] 20.19 - T[185-288] 16.448 - T[332-488] 31.823 |
| SMART |
FA58C (IPR000421) - T[52-187] 0.058 - T[331-488] 3.6E-15 |
| Gene3D |
Galactose-bd-like_sf (IPR008979) - T[53-180] 2.0E-27 - T[181-313] 2.9E-24 - T[317-488] 1.7E-44 |
| SUPERFAMILY |
Galactose-bd-like_sf (IPR008979) - T[55-161] 4.42E-25 - T[185-295] 1.36E-22 - T[331-488] 1.06E-37 |
| Pfam |
FA58C (IPR000421) - T[67-175] 1.0E-17 - T[201-292] 2.9E-14 - T[348-484] 5.8E-27 |
| ProSitePatterns |
FA58C (IPR000421) - T[100-129] . - T[381-410] . |
| CDD |
FA58C (IPR000421) - T[335-484] 3.40869E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MFGM_HUMAN | 31.045 % | 125 | 1.2E-31 |
| EDIL3_HUMAN | 29.052 % | 116 | 3.88E-28 |
| FA5_HUMAN | 28.492 % | 124 | 7.44E-30 |