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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S3...' > 
  2. Transcript 'Haaura.CG.MTP2014.S1...' > 
  3. Transcript 'Haaura.CG.MTP2014.S1...' > 
  4. Transcript 'KH2012:KH.C5.392.v1....' > 
  5. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S2288.g16487.02.t

Possible name(s)

CHSY1; CHSY3; CSGALNACT1

Gene model

Phmamm.CG.MTP2014.S2288.g16487

Location

S2288 [14,147 / 18,263]

Sequences

Amino acid sequence

Length: 665

>Phmamm.CG.MTP2014.S2288.g16487.02.p
QMQELFYEHYYLRKGYIDPNVDPSNPKLYSAMTLHPNKNPAYQVKLHSFMGGKKIIEKLS
KIKLLQRDVLDLSRELDRSPGIEEYMLGLHPTLHRFRPKKRDDVIPWDFINDRLLYASPP
HLARRAMPSHRQVSMRNIVMQVMRMMNENAKVRGRVIDFKQIAYGYRRVNPLYGAEYIGG
GGGGGGGGGGGGGGGGGGGYKGKKMTLPVRRHAYLQQSFVRTEMWEDDPLNISAITRKIT
ESRRGIVDSVFDSFLKGSKSFLVAMGIGGTKPQAEVLPVVVPSVEENKDKKLRMDSARFT
SYDKDPENTDVPTVNLIVPLVGRVDTFRNFMTNLAAVSLSRGDPVSLLVVLFKQTDPVKQ
QESDITIEILNSYAERFPLYDLRHIQIGGEFSRGMALEIGASHFSNDSLLFFCDVDVVFD
TSFTRKCRANSVRGSKVYYPILFSEYHPQFDITLTAWRNSEPNISALEALQDAAAIRRQQ
SHKDHFEVTNSTGYWRNYGYGLLCVHQSDFINSGGFNIKIQGWGLEDVDLVDKFVSGLKT
GPITGAQRRNLEPEMVSANKRALTIVRTPDPSLVHVYHPSTCNPDLAENQLRMCRASRAS
GITSVHNLAVAWRRNNLGRHFYHPDEIRDPVSDIVPLVADDKRNAAREKRQRKMASQLDR
PKENR

Nucleotide sequence

Length: 2,845

>Phmamm.CG.MTP2014.S2288.g16487.02.t
TGCAGATGCAGGAATTGTTTTACGAGCATTACTACCTCCGCAAGGGTTACATTGACCCAA
ACGTTGATCCTTCCAACCCAAAACTATATTCTGCTATGACGCTTCATCCAAACAAGAATC
CAGCTTACCAGGTCAAGCTGCATTCGTTTATGGGTGGCAAAAAGATCATTGAAAAGCTAA
GCAAGATAAAACTGCTCCAACGTGATGTGTTGGACCTCAGCCGGGAGTTGGATCGAAGTC
CTGGAATTGAAGAATACATGCTTGGCTTACATCCAACTCTTCACCGTTTTCGGCCCAAGA
AGCGAGATGACGTAATCCCGTGGGATTTTATCAATGACCGTCTACTTTACGCATCTCCTC
CGCATTTGGCGAGACGTGCGATGCCTAGTCATCGGCAGGTCTCAATGCGCAATATTGTTA
TGCAGGTAATGCGGATGATGAATGAAAACGCCAAGGTGCGCGGCCGAGTGATCGACTTTA
AGCAAATTGCCTATGGATACAGGCGGGTGAATCCTCTGTACGGCGCCGAGTACATAGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT
ACAAGGGTAAGAAGATGACGCTTCCAGTCAGGAGACACGCCTATCTCCAACAGTCGTTCG
TCCGCACGGAAATGTGGGAAGACGACCCCCTGAACATTAGCGCCATCACGCGGAAAATCA
CCGAATCGAGGCGCGGAATTGTTGATTCAGTATTTGATTCCTTTTTGAAAGGTTCAAAAT
CATTTTTGGTGGCCATGGGAATAGGTGGGACTAAGCCTCAAGCAGAAGTCCTTCCTGTAG
TTGTGCCATCGGTCGAAGAGAATAAGGACAAAAAGCTGCGTATGGATTCTGCACGCTTTA
CTTCGTATGACAAGGATCCAGAAAACACAGATGTGCCCACTGTGAACCTTATTGTTCCTT
TAGTCGGACGCGTTGATACGTTTAGAAATTTTATGACCAATCTGGCCGCAGTCAGTTTGT
CACGCGGTGACCCGGTTAGCCTTTTAGTTGTTCTGTTTAAGCAGACCGATCCAGTCAAGC
AACAAGAATCGGATATCACGATCGAGATTTTGAACTCCTACGCAGAGAGGTTTCCACTCT
ACGACCTCCGCCATATTCAAATTGGTGGCGAGTTTTCACGGGGCATGGCTCTTGAAATTG
GGGCTTCACATTTTTCAAACGATTCGTTGCTGTTCTTTTGCGACGTCGACGTTGTGTTTG
ACACCAGTTTTACTCGTAAATGTCGCGCAAACAGCGTTCGGGGATCAAAAGTGTACTACC
CAATCCTTTTCAGTGAGTATCACCCACAGTTTGATATCACGTTGACCGCTTGGCGCAATT
CAGAGCCCAATATAAGTGCTTTGGAGGCCCTGCAGGACGCTGCGGCAATACGGAGACAAC
AAAGCCACAAAGACCATTTTGAAGTAACGAACTCAACTGGATATTGGCGAAATTACGGTT
ATGGATTGTTGTGCGTCCACCAAAGTGATTTTATCAACTCAGGAGGCTTTAACATAAAAA
TCCAGGGCTGGGGTTTGGAAGACGTGGACCTAGTGGACAAATTTGTAAGCGGACTGAAAA
CTGGCCCTATTACAGGTGCCCAGAGAAGAAACTTGGAACCTGAAATGGTCAGTGCTAACA
AGAGGGCGCTGACCATAGTACGAACACCGGACCCGTCTTTGGTGCACGTCTACCATCCAT
CCACGTGCAATCCTGACCTTGCAGAAAACCAGCTTCGCATGTGCCGAGCTTCTCGTGCAT
CCGGGATCACATCAGTTCACAATCTTGCGGTTGCATGGCGACGAAACAACTTAGGACGCC
ACTTCTACCACCCGGACGAGATCCGCGACCCGGTAAGCGACATCGTGCCGCTAGTTGCCG
ACGATAAGCGAAATGCAGCACGCGAAAAGCGACAAAGAAAAATGGCGTCTCAGTTAGACC
GCCCGAAAGAAAACAGATGACCGCAGTTTAAGTAATAGGCAATCACATGTAAGGGAGGCA
CTACTTGAAGCAAAGAGATAAAGACGCCAAGCGGTGCTAACACAGCTATGGCGGGATTAT
GTGGATGGTGAACAGAACTCACTCGGCACTTCTCGTTTCTTCAAGGGGTCTTGTTTTTCT
ATTTATTAGTCGAACAAAACTACACTGACACATGCATTTTATGATTGACCCTTTCATAGA
AGTATTACTTGATCACTGTTTAAAGTATTGGCTTCTAGAAATCGCATTTGAGGCATTTTA
TTGATTACACATATTATTGAATTAAAAAATTGGTATTGAACAAATTATTTCTAGGTGCAC
AATTCACTTACCAATGGTATGCGTTATTAACAATGATGTTTCAAGTATTATTTGCTGTAG
GACTTAAATCAGTAAAAAAAAATCTTTTGTAAAGAGGCATGTAACAACTGAACAAAACGT
TCGGACAAAAATTTGTCAAATTCTCGCGTACTTGTTGCTCACACACTACACATTGTAATA
TCGGACGTTGTTTCGACCGTTGCCTTCGCTACCCTTTATGCAAATGTCTACCTCAAAACT
TAATAAAAAATGGCAGTTTTACTCCTCCGCTCGATGTCGCACCGGAGCCACCCGTGCAGT
TTCTTGATGTCATGTGACGTGTCACTGTGACGAACAGTCCAAACGGTGATCGGGATTTTT
TGACTTCGGAGCGAAATCAGTGTTTTCAAGTTCTTGTTGCAAACTTTTCGATTTTGTTTA
CTACTTTTTTTTACGCATTTTTTGTTGCAGTATTTTTATCTGACATTTCACAATACACAC
TTAAATACAAAAAATGCTTTACGCT

InterProScan

Pfam
Chond_GalNAc (IPR008428) - T[1-178] 6.4E-41 - T[200-608] 2.0E-89
SUPERFAMILY
Nucleotide-diphossugar_trans (IPR029044) - T[302-599] 9.84E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CHSS3_HUMAN 35.096 % 374 2.46E-118
CHSS1_HUMAN 37.4 % 394 6.97E-127
CGAT1_HUMAN 33.01 % 174 3.88E-47