Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S228.g05740.01.t

Possible name(s)

PDSS1; PDSS2

Gene model

Phmamm.CG.MTP2014.S228.g05740

Location

S228 [159,982 / 164,694]

Sequences

Amino acid sequence

Length: 396

>Phmamm.CG.MTP2014.S228.g05740.01.p
KMNVATRLLGRKPNSCSCWLKCSYSFQSITNGLTKDSNQAINKAVYDAEKIVGFPTSFLS
LRALLSNELSAVALHLRKLVRTNHPLIKTARGMLFDSKHNVQVRGLVVLLLSKAIADKDG
GIEASEIYSRQRSLAELTELIHTAFLIHRGLVDVETLLKVDSKNSRGELELGNKMAVLSG
DFLLANACVALSELKNSKVVDLMSSSISDMSHGFFVLPESGEFSHITSLEDLPMSLTQWR
DIMYLAHGSLLSNACRASVELAGKSVEYGNTASEFGKHLILAQLANFDLQRVNNGNGNNG
QNHNFLSEICMLPVVLAAEQNNGQKWMEQFLENEGNEYKLCKDKLLTSVKQNTKAMEDAD
QTRKCHRNLALQSLSELPLCEERTSLELLTNAFAGS

Nucleotide sequence

Length: 1,238

>Phmamm.CG.MTP2014.S228.g05740.01.t
GAAAATGAATGTTGCCACAAGACTTTTGGGACGCAAACCAAATTCGTGTTCGTGTTGGTT
AAAGTGCTCTTATTCATTCCAATCAATCACAAATGGATTGACAAAAGATTCCAACCAAGC
AATTAACAAAGCTGTGTATGATGCCGAAAAGATAGTTGGCTTTCCAACCTCATTCTTGAG
TTTAAGGGCACTGCTAAGCAATGAGTTAAGTGCTGTTGCTCTACATCTGAGAAAACTTGT
CAGAACAAACCACCCTTTAATAAAAACTGCAAGAGGTATGTTGTTTGATTCAAAACATAA
TGTGCAAGTCAGAGGGTTGGTGGTTCTACTCTTGTCAAAGGCAATTGCTGACAAAGACGG
AGGCATTGAAGCGAGTGAAATCTACAGCAGGCAGCGCTCGCTTGCAGAGCTAACTGAACT
TATTCATACTGCATTTTTAATCCATCGTGGCTTGGTTGATGTTGAAACATTGCTGAAAGT
TGACAGCAAAAATTCCAGGGGTGAACTGGAGTTGGGCAACAAGATGGCAGTTTTAAGTGG
CGATTTTCTTCTGGCCAATGCTTGTGTTGCCTTATCAGAGTTAAAAAACAGCAAGGTTGT
TGATTTGATGTCATCATCTATCAGTGATATGTCACATGGATTTTTTGTCCTCCCTGAAAG
TGGGGAGTTTTCCCACATTACTTCACTTGAAGATCTTCCAATGAGTTTGACGCAGTGGAG
GGACATAATGTATCTAGCTCATGGAAGCCTACTGTCAAACGCTTGTAGGGCATCTGTGGA
ATTGGCAGGAAAGAGTGTGGAATATGGAAACACTGCATCTGAGTTTGGAAAACACCTTAT
ACTGGCACAACTGGCAAACTTTGATCTACAGCGAGTGAACAATGGAAATGGAAACAATGG
GCAGAATCACAATTTTTTGTCAGAAATTTGTATGTTGCCTGTAGTATTGGCTGCTGAGCA
AAATAATGGACAAAAATGGATGGAACAATTCTTAGAGAACGAAGGAAATGAATACAAACT
CTGCAAAGATAAGCTGTTAACATCTGTGAAGCAAAACACAAAAGCCATGGAAGATGCAGA
TCAGACTCGAAAATGTCACAGAAACCTGGCACTACAATCTCTTTCTGAACTACCTCTTTG
TGAAGAAAGGACTTCTCTAGAACTCTTAACTAATGCTTTTGCTGGTTCATGATGCACTGT
TGTGCTACTACAAACATGCACTGTTCGAAATACTTACC

InterProScan

SUPERFAMILY	Isoprenoid_synthase_dom_sf (IPR008949) - T[51-391] 6.91E-26
Gene3D	Isoprenoid_synthase_dom_sf (IPR008949) - T[58-394] 5.7E-45
Pfam	Polyprenyl_synt (IPR000092) - T[102-333] 3.9E-15

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
DLP1_HUMAN	39.541 %	242	1.23E-76