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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S1...'
  2. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S229.g05745.01.t

Possible name(s)

AC026398.1; ACSL1; ACSL5

Location

S229 [22,523 / 31,011]

Sequences

Amino acid sequence

Length: 648

>Phmamm.CG.MTP2014.S229.g05745.01.p
MSEEQAETGVQQTTEEVQQQPEQSATEEVQQQQPEENGQAEQTDEKPENGSAPQTEVNDP
LCTFKAVPLSEFHKKQSVAVGGNEQIRASPCLVNDQLVEYVDPKVRTLHENFLRGLRVSS
EFGGNEEIRASPCLVNDQLVEYVDPKVRTLHENFLRGLRVSNGGPCLGWRPTPTSPYEWI
TYQQVLDRTQHFGSGLLLEGATADPSQFIGIFSQNRVEWKITEQACNSYSMVIVTLYDTL
GPAAIEHIVKQCELQIIVVDKNPKLAVLLKGVQEGKYSIKLIVAMETIDDDNKKLADECG
VKVMTFSEVEENGKANLKDFVPPKPDDLHTICYTSGTTGLPKGVMMTHRNIVSNHAGVYG
VGKTHFLDMGPNDVYISYLPLAHVFERLLAVQMYYLGGRVGFFQGDIKLLLSDIAELKPT
VFAMVPRLINRIYDKIHAGVAGSAIKKFLLDKAHKSKLAKLKKGVVTRSSIWDSLVFKKV
QNLVGGRVKFCITGAAPVSTDVLNFMRCALGVYFTEGYGQTEATAGIAISVPGDYYSGSV
GTPTLSNYVKLVDVPEKNYFAKDGVGEICAKGPNIFQGYYKNEEKTKEALDEDGWLHTGD
VGKWLPNGSLKIIDRKKHIFKQAQGEYIAPEKIEQVLVQSAAVGQVRE

Nucleotide sequence

Length: 1,947

>Phmamm.CG.MTP2014.S229.g05745.01.t
ATGTCGGAAGAACAAGCGGAAACCGGAGTACAACAAACTACAGAAGAAGTACAACAACAA
CCGGAACAATCAGCTACAGAAGAAGTACAACAACAACAACCAGAAGAAAACGGACAAGCT
GAACAAACTGATGAGAAACCCGAAAACGGCAGCGCACCACAAACGGAAGTTAACGACCCA
CTTTGCACCTTTAAAGCTGTGCCGTTGTCTGAATTCCACAAGAAACAATCCGTCGCTGTT
GGGGGCAACGAGCAGATTCGAGCCTCCCCATGTCTTGTCAACGACCAACTTGTCGAGTAT
GTTGATCCTAAAGTTCGAACTCTACATGAAAACTTTCTACGCGGACTCCGGGTTTCAAGT
GAGTTCGGAGGCAACGAGGAGATCAGAGCCTCCCCATGTCTTGTCAACGACCAGCTTGTC
GAGTATGTTGACCCCAAAGTTCGAACTCTGCACGAAAACTTCCTGCGCGGACTCCGGGTT
TCAAACGGAGGGCCGTGCTTAGGTTGGAGACCGACCCCCACCAGTCCTTATGAGTGGATC
ACATACCAACAGGTCTTAGACAGAACTCAACATTTCGGCTCGGGACTTCTGCTAGAGGGC
GCCACAGCCGATCCATCCCAGTTCATCGGAATCTTCTCGCAGAACCGGGTTGAGTGGAAG
ATAACTGAACAGGCTTGCAACTCTTACTCCATGGTTATTGTGACTTTGTACGACACGCTC
GGACCAGCTGCCATCGAACATATCGTCAAACAATGCGAACTTCAGATTATCGTGGTCGAC
AAGAACCCCAAGTTAGCGGTTTTGCTCAAAGGCGTGCAGGAGGGAAAATATTCTATTAAG
CTCATCGTTGCCATGGAAACCATTGATGACGACAACAAGAAATTAGCGGATGAGTGCGGG
GTCAAAGTCATGACCTTCAGCGAGGTGGAAGAAAACGGAAAAGCTAACTTGAAGGATTTT
GTGCCACCTAAGCCAGATGATTTGCACACAATCTGTTACACCAGCGGAACAACCGGTCTG
CCCAAGGGAGTTATGATGACGCATAGAAATATTGTTTCAAATCATGCCGGGGTCTACGGC
GTGGGAAAAACGCATTTCCTCGACATGGGACCCAATGACGTGTACATATCGTATCTTCCA
CTTGCCCATGTGTTTGAGCGCCTCCTAGCGGTGCAAATGTACTATCTTGGGGGAAGAGTC
GGATTTTTCCAGGGAGATATCAAACTTCTTCTAAGCGACATCGCCGAATTGAAACCAACA
GTTTTTGCGATGGTTCCGCGGTTGATCAACAGAATTTACGATAAGATTCACGCTGGTGTG
GCTGGTTCGGCCATCAAGAAATTTCTCCTGGACAAAGCTCACAAATCGAAGTTGGCAAAG
TTGAAGAAGGGTGTTGTGACAAGAAGTAGCATCTGGGATAGCTTGGTTTTCAAAAAAGTC
CAGAATTTGGTTGGAGGTCGTGTAAAGTTTTGCATAACAGGGGCAGCCCCCGTTTCGACC
GATGTTCTCAACTTTATGAGATGTGCATTGGGAGTTTATTTCACTGAAGGTTACGGACAG
ACTGAAGCAACAGCGGGAATCGCCATCTCGGTTCCCGGTGATTATTACTCGGGCAGTGTT
GGAACTCCGACGCTGAGCAATTACGTGAAGTTGGTCGATGTCCCTGAGAAAAATTACTTC
GCAAAGGATGGAGTGGGAGAAATATGCGCCAAAGGACCGAATATTTTCCAAGGATATTAC
AAAAATGAGGAAAAGACCAAAGAAGCATTGGATGAAGATGGATGGCTTCATACTGGTGAT
GTTGGAAAGTGGCTGCCGAACGGATCTCTCAAGATCATTGACCGCAAGAAGCACATCTTC
AAGCAAGCCCAGGGAGAATATATTGCACCGGAAAAAATTGAACAAGTCCTCGTCCAATCA
GCAGCTGTTGGCCAGGTACGTGAATAA

InterProScan

Pfam
AMP-dep_Synth/Lig (IPR000873) - T[176-621] 1.3E-101
ProSitePatterns
AMP-binding_CS (IPR020845) - T[331-342] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACSL1_HUMAN 52.741 % 565 0
ACSL6_HUMAN 51.373 % 542 0
ACSL5_HUMAN 52.344 % 555 0