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TRANSCRIPT CARD

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  1. Molecular Tool 'Cititf1 mRNA' > 
  2. Transcript 'Moocci.CG.ELv1_2.S63...' > 
  3. Transcript 'KH2012:KH.C3.372.v1....' > 
  4. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S22.g00917.01.t

Possible name(s)

GABBR1

Gene model

Phmamm.CG.MTP2014.S22.g00917

Location

S22 [228,332 / 236,636]

Sequences

Amino acid sequence

Length: 454

>Phmamm.CG.MTP2014.S22.g00917.01.p
MTGGWSGGQSCLPAAMMAIDDVNERKDVLPGYKITMIDKDSKCDAGLGLRKFYDILQDER
IFTVLTGCSSVSTPIAESAYLWRLNVIAYGASSPALSNRHFNLLMHSYKTAEDLRQRISD
EGMDLVIHQTFYDDPRVAVRNLKAFKNGIYGQKYVWFLIGWYQHDWHVIRKEKINCSIEQ
MQETVDGHFTTEIMMFDPSDQNTVSGMETVKGHFTTEIMMFDPSDQKTVSGMRSSKFVSR
LNKKLGKGAQGKGGYAEAPLAYDAVWAFALALNSTITRLSPSDLTRKSAKISKVGRVVFD
SDGSRMAITEVQRFQNGSYVPIMFYDTQSNNITWKNKIGQIVNSIPVLNSLSVLGCFLLI
TAVYAFAINEITDTLCEIRACLLTFGFSLAFSPLFAKLWTTNTLYKQSLMKQRRRRKRAE
IKQTGDDSIVIPELQQCSCNHFNLWVGIMFAYKF

Nucleotide sequence

Length: 1,365

>Phmamm.CG.MTP2014.S22.g00917.01.t
ATGACCGGAGGGTGGTCAGGGGGGCAATCTTGTCTTCCGGCAGCTATGATGGCTATTGAT
GACGTCAATGAACGAAAAGATGTTTTGCCTGGATACAAAATTACGATGATTGATAAAGAT
AGCAAATGTGATGCTGGTCTAGGCTTGCGCAAGTTCTATGACATACTGCAGGACGAGCGC
ATCTTCACTGTATTGACTGGGTGCAGCAGTGTCTCTACTCCCATCGCTGAATCGGCCTAC
CTTTGGCGATTGAACGTGATTGCTTATGGTGCAAGTTCGCCTGCCCTTTCCAACAGACAT
TTTAATTTGCTCATGCATTCTTATAAAACCGCGGAAGATTTACGTCAACGTATATCGGAT
GAGGGAATGGATCTAGTCATCCACCAAACTTTTTACGATGACCCTAGAGTTGCTGTAAGA
AATCTTAAGGCTTTCAAGAACGGAATTTACGGGCAAAAGTACGTCTGGTTTCTGATTGGC
TGGTATCAGCATGATTGGCACGTGATCCGTAAAGAAAAAATCAACTGCTCAATCGAACAA
ATGCAAGAAACGGTTGACGGACATTTTACAACAGAAATTATGATGTTTGACCCGTCGGAT
CAGAATACAGTGTCAGGAATGGAAACGGTTAAAGGACATTTTACAACTGAAATTATGATG
TTTGACCCGTCAGATCAGAAGACAGTGTCTGGAATGCGTTCATCCAAGTTCGTTTCGCGG
CTGAACAAGAAGCTTGGAAAAGGTGCACAGGGAAAAGGTGGCTATGCAGAAGCACCTCTA
GCGTATGACGCAGTGTGGGCATTTGCTCTTGCGCTCAACAGCACCATCACGCGGTTATCA
CCTAGCGACTTGACGAGGAAAAGTGCCAAAATATCAAAGGTAGGTCGTGTTGTGTTCGAC
TCGGACGGGTCAAGAATGGCCATCACCGAAGTCCAGCGATTCCAGAACGGTTCCTACGTC
CCTATCATGTTCTACGACACACAGAGCAACAATATTACGTGGAAAAACAAGATTGGTCAA
ATTGTCAATTCCATTCCTGTTCTCAATTCACTTAGTGTTCTTGGTTGTTTCCTGCTCATT
ACCGCTGTTTACGCGTTTGCTATCAACGAAATCACGGACACATTGTGTGAGATTCGAGCG
TGTCTTCTTACTTTTGGTTTCAGTCTTGCTTTTTCGCCCCTCTTCGCCAAGTTATGGACA
ACCAACACTCTGTACAAGCAAAGTCTTATGAAACAGCGAAGACGCCGAAAAAGGGCAGAA
ATAAAACAAACCGGGGATGATTCTATTGTGATCCCGGAATTACAGCAATGTTCGTGCAAC
CACTTCAATCTATGGGTTGGGATTATGTTTGCTTATAAGTTCTAA

InterProScan

PANTHER
GPCR3_GABA-B (IPR002455) - T[2-100] 2.8E-90 - T[108-207] 2.8E-90 - T[208-337] 2.8E-90 - T[341-453] 2.8E-90
SUPERFAMILY
Peripla_BP_I (IPR028082) - T[5-338] 4.04E-37
Pfam
ANF_lig-bd_rcpt (IPR001828) - T[11-101] 2.1E-12
Pfam
GPCR_3_C (IPR017978) - T[340-414] 5.3E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GABR1_HUMAN 29.553 % 290 5.64E-89