- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Moocci.CG.ELv1_2.S54...' >
- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Molecular Tool 'Ci-cdc25 MO (Ogura 2016)' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S230.g05760.01.t
Possible name(s)
TGFB1; TGFB2; TGFB3
Gene model
Location
S230 [91,117 / 100,144]
Amino acid sequence
Length: 470
>Phmamm.CG.MTP2014.S230.g05760.01.p
TVNLVQRSVVKQAFVRKLYRLEGLIKIKLCSNMRQTLCRRDGRSWSAWKCVCCPLLVVVL
LLHESPTASGCGVDYDKMRKRRIDAVRGQILSKLGFTHLPTDEQPPPDSMTVEIEAMYNR
TRDFVLEQARKKREECLEPEDNYYAQDITTVYMKNPTQTASTIAGSTAPRYKYQKSQQGV
SEFFDFDLTQTELDPDTIVTASLRVYQVPSTADGMKEQVELYHLSSPQKDGQSPTKSFLH
MQLMDTANEGWITFDVTSSVRQWIQFPNLNQGLELTVPCSNEEPPSTMKRAANRGITRKL
DVTFAGSTKISKSRGDSDAGATADREMGKEFNPHLVIMVRHPTLEASQSSNRRRKRALDA
DFCFRRKASDTNCCLRELYIDFRKDLGWNWVHAPTGYKANFCGGACPFMWSSDTQYATIL
TLYKSMNPQASSAPCCTAKDLDPLTIMYYKNGSYKFINMSDMVLLSCKCS
Nucleotide sequence
Length: 2,118
>Phmamm.CG.MTP2014.S230.g05760.01.t
GCACTGTGAATCTCGTGCAGCGTTCAGTAGTAAAGCAAGCCTTTGTGCGAAAATTGTATC
GACTTGAAGGTCTTATCAAGATCAAACTGTGTTCAAACATGCGTCAAACGCTTTGTCGAA
GAGACGGACGTTCATGGTCTGCATGGAAATGCGTTTGTTGTCCGCTGCTCGTAGTGGTTC
TGCTTCTGCACGAGTCGCCAACCGCCTCTGGCTGCGGTGTAGACTATGATAAAATGCGCA
AACGACGAATTGACGCGGTCCGCGGGCAGATCCTAAGCAAACTTGGATTCACCCACTTAC
CCACAGACGAGCAGCCGCCCCCTGATAGCATGACGGTGGAAATTGAGGCAATGTACAATC
GCACCAGAGACTTTGTTCTGGAACAGGCACGCAAAAAACGTGAGGAATGCCTGGAACCCG
AAGACAACTACTACGCCCAGGACATTACAACCGTGTACATGAAAAACCCCACCCAGACGG
CTTCCACCATTGCCGGATCCACAGCGCCCCGTTACAAGTACCAAAAAAGTCAGCAAGGTG
TCTCGGAGTTTTTCGACTTCGATCTGACGCAAACTGAGTTGGATCCTGACACGATTGTGA
CAGCATCACTTCGAGTCTACCAGGTTCCAAGCACCGCTGACGGCATGAAAGAACAGGTGG
AGCTCTATCACCTTTCGTCGCCGCAAAAAGATGGCCAATCTCCAACCAAAAGTTTTCTTC
ACATGCAACTGATGGATACAGCCAATGAGGGTTGGATTACCTTTGACGTCACATCTTCCG
TCCGTCAATGGATTCAGTTTCCCAACTTGAATCAAGGCCTCGAATTGACGGTTCCTTGTT
CGAATGAAGAACCGCCTTCAACCATGAAGCGAGCTGCCAACCGTGGGATCACCCGCAAAT
TGGATGTGACATTTGCAGGCTCAACAAAAATTTCCAAATCCCGCGGGGACAGTGATGCTG
GCGCCACGGCGGACCGAGAAATGGGAAAGGAGTTTAATCCCCACCTGGTTATTATGGTCC
GACATCCCACACTAGAGGCATCACAGAGTTCAAACAGGAGACGAAAGAGAGCGTTGGACG
CAGATTTCTGCTTCCGTCGCAAGGCCTCCGACACCAATTGCTGTCTCCGTGAATTGTACA
TCGATTTTCGCAAGGACCTCGGATGGAACTGGGTCCACGCTCCGACTGGCTACAAAGCAA
ACTTCTGTGGTGGTGCATGCCCGTTTATGTGGAGCAGCGACACGCAATACGCCACAATAC
TGACTCTCTACAAGTCGATGAACCCCCAGGCCTCATCGGCGCCTTGCTGTACAGCGAAAG
ATCTAGATCCCCTGACGATCATGTACTACAAGAACGGCTCGTACAAGTTTATTAACATGT
CCGATATGGTCTTACTCTCTTGCAAATGCAGCTGAATGTTGTGCTCTTTGTTTGTTACTT
AAGGTTAGGGGTACCCTAAGCCTTGCCACCAAAGATTCCAAGCAGCTAAACGTTCGATGT
TACAACGAGAAGTCGATGTGTTCTTTTTGTATTTATGTGAAATGTCGCCTGTGTCTGTCT
TTTATTTATATACCTTGCCTCCGCAACGTATGTAGCCTCTTCTTTAGTACTTTCTCGGTG
TTTTATTTTGATGCTGTGGGACTGCTTTGTGTTCACACCACGAACCAATCCCTCAGAATA
TTTGTTGCTGAGTGTTTTAGCATGACTGTTTGTGTGCTTGGCCCATTTGGGCGGTATTAG
ACTGCCAACTGTGACTGAGCCTCTCTCTGCCCCAAATCTTGTGTCATTGTGCCAAAAGTG
GGTTTTTACGCAAGTTTTGTAGATAGCCTGAACGCTAACATATATTTCGGAATAAAATGA
AGAATACGTATTAATACATTGCTGGTAATTTAGAATTACTAACTTTACAAAACTCTTTTG
AAAACCCACGTTAGGTGCACTTAACTTGGTCCAATGTAGTTGGAATGTTTTTTTCTTTCG
CATCTGCTGGAACGGAAGCATGAAAAGAACTTCCAACGTATATTCACTAGTATGTCAGTA
GTGGTTTGGTGATTGCTAAATTGCCTCAGTGCAGTTATAAATGTTTGTTTTGTTCGTTTA
GCGCCGATCCGCTGGCGC
| PANTHER |
TGF-beta-rel (IPR015615) - T[46-457] 1.0E-111 |
| PIRSF |
TGF-beta (IPR016319) - T[49-470] 1.8E-98 |
| Pfam |
TGF-b_propeptide (IPR001111) - T[72-286] 1.9E-26 |
| ProSiteProfiles |
TGF-b_C (IPR001839) - T[353-470] 34.504 |
| Gene3D |
Cystine-knot_cytokine (IPR029034) - T[357-470] 4.6E-35 |
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[366-469] 4.3E-31 |
| Pfam |
TGF-b_C (IPR001839) - T[372-469] 7.3E-23 |
| SMART |
TGF-b_C (IPR001839) - T[373-470] 7.7E-33 |
| ProSitePatterns |
TGFb_CS (IPR017948) - T[391-406] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TGFB3_HUMAN | 35.581 % | 253 | 1.12E-79 |
| TGFB2_HUMAN | 35.981 % | 270 | 2.17E-86 |
| TGFB1_HUMAN | 35.338 % | 223 | 1.39E-68 |