- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S230.g05760.02.t
Possible name(s)
TGFB1; TGFB2; TGFB3
Gene model
Location
S230 [91,820 / 100,046]
Amino acid sequence
Length: 438
>Phmamm.CG.MTP2014.S230.g05760.02.p
MRQTLCRRDGRSWSAWKCVCCPLLVVVLLLHESPTASGCGVDYDKMRKRRIDAVRGQILS
KLGFTHLPTDEQPPPDSMTVEIEAMYNRTRDFVLEQARKKREECLEPEDNYYAQDITTVY
MKNPTQTASTIAGSTAPRYKYQKSQQGVSEFFDFDLTQTELDPDTIVTASLRVYQVPSTA
DGMKEQVELYHLSSPQKDGQSPTKSFLHMQLMDTANEGWITFDVTSSVRQWIQFPNLNQG
LELTVPCSNEEPPSTMKRAANRGITRKLDVTFAGSTKISKSRGDSDAGATADREMGKEFN
PHLVIMVRHPTLEASQSSNRRRKRALDADFCFRRKASDTNCCLRELYIDFRKDLGWNWVH
APTGYKANFCGGACPFMWSSDTQYATILTLYKSMNPQASSAPCCTAKDLDPLTIMYYKNG
SYKFINMSDMVLLSCKCS
Nucleotide sequence
Length: 1,317
>Phmamm.CG.MTP2014.S230.g05760.02.t
ATGCGTCAAACGCTTTGTCGAAGAGACGGACGTTCATGGTCTGCATGGAAATGCGTTTGT
TGTCCGCTGCTCGTAGTGGTTCTGCTTCTGCACGAGTCGCCAACCGCCTCTGGCTGCGGT
GTAGACTATGATAAAATGCGCAAACGACGAATTGACGCGGTCCGCGGGCAGATCCTAAGC
AAACTTGGATTCACCCACTTACCCACAGACGAGCAGCCGCCCCCTGATAGCATGACGGTG
GAAATTGAGGCAATGTACAATCGCACCAGAGACTTTGTTCTGGAACAGGCACGCAAAAAA
CGTGAGGAATGCCTGGAACCCGAAGACAACTACTACGCCCAGGACATTACAACCGTGTAC
ATGAAAAACCCCACCCAGACGGCTTCCACCATTGCCGGATCCACAGCGCCCCGTTACAAG
TACCAAAAAAGTCAGCAAGGTGTCTCGGAGTTTTTCGACTTCGATCTGACGCAAACTGAG
TTGGATCCTGACACGATTGTGACAGCATCACTTCGAGTCTACCAGGTTCCAAGCACCGCT
GACGGCATGAAAGAACAGGTGGAGCTCTATCACCTTTCGTCGCCGCAAAAAGATGGCCAA
TCTCCAACCAAAAGTTTTCTTCACATGCAACTGATGGATACAGCCAATGAGGGTTGGATT
ACCTTTGACGTCACATCTTCCGTCCGTCAATGGATTCAGTTTCCCAACTTGAATCAAGGC
CTCGAATTGACGGTTCCTTGTTCGAATGAAGAACCGCCTTCAACCATGAAGCGAGCTGCC
AACCGTGGGATCACCCGCAAATTGGATGTGACATTTGCAGGCTCAACAAAAATTTCCAAA
TCCCGCGGGGACAGTGATGCTGGCGCCACGGCGGACCGAGAAATGGGAAAGGAGTTTAAT
CCCCACCTGGTTATTATGGTCCGACATCCCACACTAGAGGCATCACAGAGTTCAAACAGG
AGACGAAAGAGAGCGTTGGACGCAGATTTCTGCTTCCGTCGCAAGGCCTCCGACACCAAT
TGCTGTCTCCGTGAATTGTACATCGATTTTCGCAAGGACCTCGGATGGAACTGGGTCCAC
GCTCCGACTGGCTACAAAGCAAACTTCTGTGGTGGTGCATGCCCGTTTATGTGGAGCAGC
GACACGCAATACGCCACAATACTGACTCTCTACAAGTCGATGAACCCCCAGGCCTCATCG
GCGCCTTGCTGTACAGCGAAAGATCTAGATCCCCTGACGATCATGTACTACAAGAACGGC
TCGTACAAGTTTATTAACATGTCCGATATGGTCTTACTCTCTTGCAAATGCAGCTGA
| PANTHER |
TGF-beta-rel (IPR015615) - T[14-425] 7.4E-112 |
| PIRSF |
TGF-beta (IPR016319) - T[17-438] 1.4E-98 |
| Pfam |
TGF-b_propeptide (IPR001111) - T[40-254] 1.5E-26 |
| ProSiteProfiles |
TGF-b_C (IPR001839) - T[321-438] 34.504 |
| Gene3D |
Cystine-knot_cytokine (IPR029034) - T[325-438] 4.0E-35 |
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[334-437] 3.78E-31 |
| Pfam |
TGF-b_C (IPR001839) - T[340-437] 6.5E-23 |
| SMART |
TGF-b_C (IPR001839) - T[341-438] 7.7E-33 |
| ProSitePatterns |
TGFb_CS (IPR017948) - T[359-374] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TGFB3_HUMAN | 35.581 % | 253 | 5.81E-80 |
| TGFB2_HUMAN | 35.981 % | 270 | 7.62E-87 |
| TGFB1_HUMAN | 35.338 % | 224 | 4.14E-69 |