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TRANSCRIPT CARD

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  1. Clone 'cicl047n10'
  2. Clone 'cilv006o12'
  3. Clone 'cien97754'
  4. Clone 'cima84923'
  5. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S2333.g16547.01.t

Possible name(s)

NLRP12; NLRP7; NOD1

Location

S2333 [9,747 / 11,418]

Sequences

Amino acid sequence

Length: 556

>Phmamm.CG.MTP2014.S2333.g16547.01.p
MARIVDKGNKLKGDITVKNMFERAKIEAVDIENDKKTVGVVGVVGVGKSTLTRVVVENIL
VKKMLSNASFIFYITVGCIDLKRETDLFELLFSSLIAEGSLSIDEAEKKELINFILQDPN
TVVIIDGLDEAKTENLHTYPQVLPFAKAKPMALIYNILNSKLLKNAYKLVTSRITQFIDA
SPEYRPKFVLEILGLAPSEQQKLARCVCGEQFDRVWKILQNNPALLECCVIPVNMLMALN
FLLGGGGTLGTITLTGVYIAMLNRYIRSKHCGFPDGMDVVKKLCDLAFDGWQKNKSLFSD
EDLEQFKIPLKTQQAFVNTEVEDFAIRILKQDKVSYFVHRSWQELLVALRLVMFMPLYEF
KSFLKDAFESGDLENVVKFCFGICKDSVFEKAKRLSPAAQFDEIEEKKKFLGLIAESKAK
KLSKSVRESSKNHDMQKWFHLFACLNELGSDDTSFPVTKLLPTVADIEGSVFSSDITNMV
SLYKLNNTTLNLKNVEVSFVGNALQSFETFVQEHRVKVSMITGYCQHVSVLVPIRDVQNI
RFVKFVWPVSQRFGFG

Nucleotide sequence

Length: 1,671

>Phmamm.CG.MTP2014.S2333.g16547.01.t
ATGGCAAGAATAGTAGATAAAGGAAATAAACTGAAAGGTGACATCACAGTTAAAAATATG
TTTGAAAGGGCAAAGATTGAAGCAGTAGACATTGAAAACGATAAAAAGACAGTTGGTGTT
GTTGGTGTAGTTGGAGTGGGAAAAAGCACATTGACAAGAGTTGTCGTAGAAAACATTTTG
GTCAAGAAAATGCTTTCCAATGCTTCATTTATATTTTACATCACAGTGGGCTGCATTGAC
CTTAAGCGAGAAACAGATTTGTTTGAATTACTTTTCTCATCATTGATTGCAGAGGGAAGT
CTTTCAATAGATGAAGCAGAAAAAAAAGAGCTGATTAATTTCATCTTGCAGGATCCCAAC
ACAGTAGTAATCATTGATGGTCTGGATGAAGCCAAAACTGAAAACTTACATACATATCCA
CAAGTTTTACCATTTGCAAAAGCAAAACCAATGGCACTAATATATAACATTTTAAACAGC
AAACTTCTTAAGAATGCTTACAAGTTGGTAACATCAAGAATTACTCAGTTTATTGATGCT
TCTCCAGAATACAGACCCAAATTTGTTTTGGAAATTTTGGGGTTAGCACCGAGTGAACAG
CAAAAACTGGCTAGGTGTGTATGTGGTGAACAGTTTGACAGAGTTTGGAAAATCCTCCAA
AACAACCCAGCTTTGTTGGAATGCTGTGTAATACCTGTCAACATGCTTATGGCTCTTAAC
TTTCTGTTGGGAGGAGGAGGAACACTAGGTACTATTACACTGACGGGTGTGTACATTGCA
ATGTTGAACAGATACATTCGTTCAAAGCATTGTGGGTTCCCTGATGGCATGGATGTGGTT
AAGAAGCTTTGTGACCTGGCATTTGATGGGTGGCAAAAAAACAAATCTCTGTTTTCTGAT
GAGGACTTAGAGCAGTTTAAGATTCCATTGAAAACACAACAAGCATTTGTAAATACAGAA
GTAGAGGATTTTGCCATTCGTATTTTGAAACAAGACAAAGTTAGCTACTTTGTTCATCGC
TCTTGGCAAGAGTTGTTGGTTGCACTCAGACTTGTTATGTTCATGCCTCTATATGAGTTT
AAATCTTTCCTTAAGGATGCTTTTGAGTCCGGAGATTTAGAAAATGTTGTAAAGTTTTGC
TTTGGTATTTGTAAAGACAGTGTGTTTGAAAAAGCAAAACGACTTTCTCCTGCAGCACAA
TTTGATGAAATAGAAGAGAAGAAAAAGTTTCTTGGTTTAATTGCTGAATCCAAAGCAAAG
AAACTGTCAAAGAGTGTGAGGGAAAGTAGTAAAAATCATGACATGCAAAAGTGGTTTCAT
CTTTTTGCATGTTTAAATGAACTTGGCAGTGATGATACCAGCTTTCCTGTGACCAAGCTT
CTACCAACTGTTGCTGACATAGAGGGTTCTGTATTTTCATCTGATATCACAAACATGGTT
TCGCTTTACAAACTGAACAATACCACTCTGAATTTGAAAAATGTTGAGGTGTCATTTGTT
GGAAATGCTTTGCAGAGTTTTGAAACATTTGTGCAAGAACACCGAGTTAAAGTTAGTATG
ATAACTGGATATTGTCAACATGTTTCAGTATTAGTTCCTATTAGAGATGTACAGAATATT
CGGTTTGTCAAATTTGTTTGGCCAGTTTCGCAAAGATTCGGTTTCGGCTGA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[33-227] 2.78E-11
ProSiteProfiles
NACHT_NTPase (IPR007111) - T[36-173] 13.374
Pfam
NACHT_NTPase (IPR007111) - T[37-207] 2.0E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value