- Transcript 'Boleac.CG.SB_v3.S108...' >
- Molecular Tool 'Snail MO (Hudson 2015)' >
- Molecular Tool 'Ci-Bra(251bp)/Ci-Sna***' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S23.g00943.01.t
Possible name(s)
CPS1; GMPS
Gene model
Location
S23 [160,850 / 164,999]
Amino acid sequence
Length: 683
>Phmamm.CG.MTP2014.S23.g00943.01.p
RFDKCLAYTCNMAKVVILDAGSQYGKVIDRKVRELSIHSELLPLQTPASQLKDAGFECII
ISGGPASVHLSEAIAVDQEIFNLHVPVLGICYGMQLMNQHFGGVVETSPVREDGQFDTVV
ERSCALFRDLESDNQSVLLTHGDSVKTVAPGFTTVAKSGNLITAIAKESRRLYGLQFHPE
VDLTDNGKQMLKTFLYNISGLKPTYTVGSREEACLNLIKSTVGTSKVLVLVSGGVDSSVL
TALCYKALKPTQVIALHVDNGFMRKNESQNVVKALKSRGIDVKLVNAGNIFYNSTTTLNV
KHPKGAKRKIVSRVLCQTLDPEEKRKIIGDTFMNVVDFEAQELEISIDDCYLAQGTLRPD
LIESASSLVSTNADAIKTHHNDTELVRALRAKGRILEPLKDFHKDEVRKLGKLLGLPNEV
LMRHPFPGPGLAIRVICAEEIFQCADFSHTQTMLRIIASYSNSISKPHALLQKIHAVMST
DQEREKLRIYTERFPMKATLLPIKTVGVQGDCRTYGYVVGLSSNNEKPDWEVLFFLAKMI
PRICHSVNRVAYVFGAAVTDQIQDVTPTVLSFNVLATLRQCDFVADKILTKHNVYNKISQ
MPVVLLPLHFDRDIFVREPSCQRSIVLRPFITKDFMTGLAAHPGKDIPSEVVTEMVKEIE
KVPGISRVLYDLTSKPPGTTEWE
Nucleotide sequence
Length: 2,154
>Phmamm.CG.MTP2014.S23.g00943.01.t
TTCGGTTTGATAAATGCTTGGCATACACATGTAATATGGCCAAAGTAGTGATTTTGGATG
CAGGATCACAGTATGGAAAAGTCATTGACAGAAAAGTAAGAGAACTGAGTATTCATTCTG
AACTACTGCCACTGCAGACCCCAGCAAGTCAACTCAAAGATGCAGGTTTTGAATGCATCA
TTATTTCTGGAGGCCCAGCTTCTGTGCATTTATCAGAGGCCATAGCTGTTGATCAGGAAA
TTTTTAATCTTCATGTTCCTGTGTTGGGAATTTGTTATGGTATGCAACTTATGAATCAGC
ATTTTGGCGGAGTTGTTGAAACATCACCTGTAAGGGAAGACGGACAATTTGATACAGTAG
TTGAGCGAAGTTGTGCACTTTTTCGAGATCTAGAGTCTGATAATCAATCTGTTTTGTTAA
CCCATGGTGACTCTGTAAAGACTGTTGCCCCTGGATTTACGACTGTTGCCAAATCAGGTA
ATCTTATCACAGCAATTGCAAAGGAAAGTAGAAGATTGTATGGACTTCAGTTTCATCCTG
AAGTTGATCTGACTGACAATGGAAAACAAATGTTAAAAACCTTTCTTTACAACATATCTG
GTTTGAAGCCAACATACACTGTGGGAAGTCGTGAAGAAGCTTGTTTAAATTTAATCAAAT
CCACAGTTGGTACTTCCAAAGTTTTGGTGCTTGTGAGTGGCGGCGTAGATTCTTCTGTCT
TGACAGCTTTGTGTTACAAAGCACTAAAACCAACCCAGGTTATAGCATTGCATGTGGACA
ATGGTTTCATGCGAAAAAATGAATCACAAAATGTAGTAAAGGCATTAAAAAGTCGTGGAA
TTGATGTTAAACTTGTAAATGCTGGAAACATATTTTACAACAGCACTACAACTCTGAATG
TCAAGCATCCGAAAGGGGCAAAACGAAAGATTGTTAGTCGAGTTTTATGTCAAACATTAG
ATCCAGAAGAAAAACGAAAAATCATTGGCGATACTTTTATGAATGTTGTTGATTTTGAAG
CACAAGAACTTGAGATTTCAATAGATGATTGTTATCTGGCACAAGGAACCCTCAGACCTG
ATTTGATTGAATCAGCTTCCAGTCTTGTCAGTACAAATGCTGATGCAATAAAAACACACC
ACAATGATACTGAACTTGTCCGAGCTCTCAGAGCAAAAGGTCGTATCCTGGAGCCCTTAA
AGGACTTTCACAAGGACGAAGTGAGAAAATTAGGAAAATTGCTAGGGCTGCCCAATGAAG
TCCTGATGAGACACCCATTTCCTGGGCCAGGTTTGGCAATTCGTGTCATCTGTGCTGAGG
AAATTTTTCAATGTGCTGACTTTTCCCATACCCAAACAATGCTGCGAATTATTGCTAGTT
ACAGCAACTCAATCAGCAAGCCACATGCTTTGTTACAAAAAATCCATGCAGTAATGTCTA
CGGATCAAGAGCGAGAAAAACTGAGAATTTATACAGAAAGATTTCCAATGAAAGCTACGT
TGCTGCCAATTAAAACAGTTGGTGTGCAAGGAGATTGCCGGACATATGGTTATGTTGTTG
GCCTGTCATCGAACAATGAAAAACCAGATTGGGAAGTTTTATTCTTTCTTGCCAAAATGA
TTCCCAGGATATGTCATTCAGTAAATCGTGTAGCTTATGTCTTCGGTGCAGCAGTAACTG
ATCAGATTCAGGATGTTACTCCAACTGTCTTGTCCTTTAATGTTTTGGCAACTTTACGAC
AATGTGACTTTGTAGCAGACAAGATTCTTACCAAACACAATGTTTACAACAAAATTAGTC
AGATGCCAGTTGTTTTACTGCCTCTACATTTCGATCGAGACATCTTTGTACGTGAGCCTT
CCTGTCAAAGATCCATTGTTTTGCGTCCGTTCATAACAAAAGATTTTATGACTGGGCTTG
CAGCACACCCGGGCAAAGATATTCCTTCTGAGGTTGTAACAGAAATGGTAAAAGAAATTG
AAAAGGTTCCAGGAATTTCAAGGGTTCTGTACGATCTGACATCAAAGCCACCTGGAACAA
CTGAATGGGAGTAGTTTTTTGGCTGCACACTTATATAAAGTAAAAATGTGCTGCTTTTGG
TATTTCCTGCTGCGACTTTACAGTTGATTGTGTTTTAACTCGAATAAAAGAGAG
| SUPERFAMILY |
Class_I_gatase-like (IPR029062) - T[11-200] 1.01E-41 |
| Gene3D |
Class_I_gatase-like (IPR029062) - T[12-205] 1.1E-51 |
| ProSiteProfiles |
GATASE (IPR017926) - T[14-204] 30.925 |
| TIGRFAM |
GMP_synth_GATase (IPR004739) - T[15-200] 4.4E-55 |
| CDD |
GMP_synth_GATase (IPR004739) - T[15-195] 1.2346E-80 |
| Pfam |
GATASE (IPR017926) - T[17-196] 3.0E-34 |
| ProSiteProfiles |
GMPS_ATP_PPase_dom (IPR025777) - T[205-423] 65.825 |
| Gene3D |
Rossmann-like_a/b/a_fold (IPR014729) - T[206-434] 1.1E-83 |
| Pfam |
NAD/GMP_synthase (IPR022310) - T[221-302] 9.7E-8 |
| CDD |
GMP_synth_C (IPR001674) - T[226-682] 5.85387E-112 |
| Pfam |
GMP_synth_C (IPR001674) - T[489-552] 1.4E-4 - T[589-682] 7.9E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GUAA_HUMAN | 60.389 % | 828 | 0 |