- Transcript 'KH2012:KH.S1776.2.v1...' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S23.g00947.01.t
Possible name(s)
CDK5RAP1; CDKAL1
Gene model
Location
S23 [175,688 / 180,215]
Amino acid sequence
Length: 455
>Phmamm.CG.MTP2014.S23.g00947.01.p
MPSQCAEELDDIEDIATFEARLQSTKAVILPHAQSAKNKRNILPNNTDEEIEGKNQDELS
RKGRKLGKQVVVAGCVPQGAPRQQYIKGLSMIGVQQIDRVVEVVEETLKGNSVRLLGQKK
VNGKKTGGAALSLPKIRRNPLIEIISINTGCLNACTYCKTKHARGNLGSYPVLEIVERAI
QSFDEGVVEIWLTSEDTGAYGRDIGSSLPELLWQLVEVIPDGCMLRVGMTNPPYILEHLE
EMAKILNHPRVYAFMHVPVQSGADRTLYEMQREYTVGEFSHVVDFLREKVPGISIATDII
CGFPTETPEDFEETLELCKKYKFPSLFMNQFFPRPGTPAAKMTQIDRKEIKKRTKKLSEV
FSSYEPYGHQLGKRQTVLVTEIAHDKVHYVAHNKYYEQVIVDMEEDLMGKMFEVDIIETG
KHYLRGRRVAEVSSPNSTSPLPKGCVSGLKTEVRL
Nucleotide sequence
Length: 1,368
>Phmamm.CG.MTP2014.S23.g00947.01.t
ATGCCATCTCAATGTGCTGAAGAGTTAGATGACATTGAAGATATCGCCACCTTTGAAGCA
AGACTTCAATCAACAAAAGCGGTAATTCTTCCACATGCACAAAGTGCCAAAAATAAAAGG
AACATATTACCAAATAACACAGATGAAGAAATAGAAGGGAAAAATCAAGATGAGTTGTCC
AGAAAAGGACGAAAGCTTGGCAAGCAAGTAGTGGTGGCTGGTTGCGTTCCACAAGGTGCT
CCACGTCAACAGTATATTAAAGGCTTGTCAATGATTGGAGTTCAACAGATTGATAGAGTG
GTAGAGGTGGTAGAAGAAACCCTAAAAGGCAACAGTGTTCGATTGTTGGGTCAAAAGAAG
GTCAATGGAAAAAAGACAGGGGGAGCTGCATTGTCTTTGCCCAAAATTCGACGAAACCCA
CTTATTGAAATCATAAGCATTAATACTGGATGTTTAAATGCTTGCACATACTGCAAAACA
AAACATGCAAGAGGAAATCTTGGGAGTTATCCTGTTTTAGAAATTGTGGAAAGGGCAATA
CAATCATTTGATGAGGGTGTGGTAGAGATTTGGTTGACAAGTGAAGACACTGGAGCGTAT
GGACGAGATATTGGAAGTTCTTTGCCTGAACTTCTTTGGCAGTTAGTGGAAGTTATTCCT
GACGGTTGTATGTTAAGAGTTGGAATGACCAATCCTCCATACATTCTTGAACATTTAGAG
GAAATGGCAAAAATTCTCAATCATCCCCGAGTGTACGCATTCATGCATGTGCCTGTTCAA
TCTGGTGCAGACCGGACTCTGTATGAGATGCAGCGTGAATACACAGTTGGGGAATTTTCA
CATGTTGTTGATTTTCTTCGCGAGAAGGTCCCAGGAATTTCAATAGCTACTGACATCATA
TGCGGCTTTCCCACAGAAACACCAGAGGATTTTGAGGAAACGTTGGAATTGTGCAAAAAA
TACAAGTTTCCTAGTTTATTTATGAATCAGTTTTTCCCACGACCTGGAACGCCAGCAGCG
AAAATGACACAGATTGATAGAAAAGAGATAAAAAAGCGAACGAAAAAGCTCTCTGAAGTA
TTTTCGTCATATGAACCTTATGGACATCAACTAGGAAAACGGCAGACGGTGTTGGTGACA
GAAATTGCACACGACAAAGTTCATTACGTTGCGCATAACAAATATTACGAGCAAGTTATT
GTCGACATGGAGGAAGATTTGATGGGAAAAATGTTTGAGGTTGACATTATTGAAACAGGA
AAGCATTATTTGCGAGGAAGGCGTGTTGCGGAAGTATCTTCACCAAATTCAACATCTCCG
CTGCCAAAAGGTTGCGTGTCCGGTTTAAAAACAGAAGTAAGACTTTAA
| ProSiteProfiles |
Methylthiotransferase_N (IPR013848) - T[1-109] 10.371 |
| TIGRFAM |
Methylthiotransferase (IPR005839) - T[59-426] 4.1E-80 |
| TIGRFAM |
MiaB-like_B (IPR006466) - T[62-427] 2.3E-127 |
| SMART |
Elp3/MiaB/NifB (IPR006638) - T[140-359] 2.1E-36 |
| Gene3D |
rSAM_horseshoe (IPR023404) - T[141-367] 7.3E-69 |
| SFLD |
rSAM (IPR007197) - T[145-363] 5.2E-23 |
| ProSitePatterns |
Methylthiotransferase_CS (IPR020612) - T[145-165] . |
| Pfam |
rSAM (IPR007197) - T[146-317] 2.6E-14 |
| ProSiteProfiles |
TRAM_dom (IPR002792) - T[368-430] 10.048 |
| Pfam |
TRAM_dom (IPR002792) - T[370-427] 6.4E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDKAL_HUMAN | 69.949 % | 589 | 0 |