Aniseed - Transcript Card

Region 'REG00000353' >
Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S2418.g16649.01.t

Possible name(s)

CD22; CEACAM5; HSPG2

Gene model

Phmamm.CG.MTP2014.S2418.g16649

Location

S2418 [15,443 / 19,040]

Sequences

Amino acid sequence

Length: 324

>Phmamm.CG.MTP2014.S2418.g16649.01.p
MLLGNHYSMIVVETSNNVVNTTNGVLVNARQDVVMYCLIDANPEALCQFYINNTLVQQPS
CVYQQRIESSSFVSCTGQNVAGNQTSSNLTITAVKQRIPDVKSSHDTSEILKKGDDISLI
CDVPYSYELQTTYHWGTPAKLHDINEPLLIVNNLTRFDLGYYTCHTNDLFESTQATVFLN
VTYGPEITGQNTTCNWSDVENGHCFVDFASNPLTQQYTLIDNEDDVPPNPNQTVAIAASV
SAITVAVVIILVAIIVVRKRQSKQPECDGPTHNSNVYVNEEFDQDGNSFSTDGCAGDSPG
FEPHEKHQHLIHINLTSYYFLFRL

Nucleotide sequence

Length: 975

>Phmamm.CG.MTP2014.S2418.g16649.01.t
ATGTTGCTAGGGAACCATTATAGCATGATTGTGGTTGAAACTTCCAACAACGTTGTTAAC
ACAACCAACGGTGTGTTGGTGAACGCCAGGCAAGATGTTGTGATGTACTGTTTGATTGAT
GCAAATCCTGAAGCGTTGTGTCAATTTTACATCAACAACACGCTTGTCCAACAACCATCC
TGTGTTTACCAACAAAGAATTGAAAGTTCATCATTTGTGAGCTGTACTGGTCAAAATGTG
GCTGGAAACCAAACGAGTTCAAACCTAACTATTACAGCAGTGAAACAAAGAATACCTGAC
GTTAAGTCCAGTCATGACACAAGTGAGATATTAAAGAAAGGGGATGATATATCGTTGATT
TGTGATGTTCCCTACTCTTATGAACTGCAAACAACTTACCATTGGGGCACACCAGCAAAG
CTACATGACATTAATGAACCTTTGTTAATTGTAAACAATTTAACCCGTTTTGATTTGGGA
TACTACACTTGTCATACTAATGATTTGTTTGAATCCACTCAAGCTACAGTATTCTTGAAT
GTCACTTATGGTCCTGAAATAACTGGACAAAATACAACGTGCAATTGGAGCGATGTGGAA
AACGGACATTGCTTTGTTGATTTTGCTTCAAACCCACTTACGCAACAATACACATTGATT
GATAATGAAGACGATGTTCCTCCAAATCCTAATCAAACTGTGGCAATAGCTGCAAGCGTA
TCAGCAATTACTGTGGCTGTTGTTATTATTCTTGTTGCTATAATTGTTGTAAGAAAACGC
CAGTCAAAGCAACCAGAATGCGATGGCCCAACTCATAATTCCAATGTTTACGTAAACGAA
GAGTTTGATCAAGATGGCAACAGTTTTAGTACGGATGGATGTGCGGGGGACAGTCCTGGG
TTTGAACCCCATGAAAAGCACCAACATCTCATCCATATTAATCTAACCAGTTATTACTTT
CTTTTCAGATTATGA

InterProScan

SUPERFAMILY	Ig-like_dom_sf (IPR036179) - T[25-187] 8.3E-9
Gene3D	Ig-like_fold (IPR013783) - T[65-183] 4.7E-9
ProSiteProfiles	Ig-like_dom (IPR007110) - T[99-182] 8.901
SMART	Ig_sub (IPR003599) - T[106-182] 0.0022

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value