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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C14.115.v2...' > 
  2. Transcript 'KH2012:KH.C10.549.v1...' > 
  3. Clone 'ma213f22' > 
  4. Clone 'AHC0AAA123YM19' > 
  5. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S241.g05981.02.t

Possible name(s)

Phmamm.CG.MTP2014.S241.g05981

Gene model

Phmamm.CG.MTP2014.S241.g05981

Location

S241 [83,492 / 86,960]

Sequences

Amino acid sequence

Length: 443

>Phmamm.CG.MTP2014.S241.g05981.02.p
LLSFTALVYSQIADPRCPVPNGIGSCGMCGICSQGQICCPNGCGSSCMPVPSGPQDLCPV
DRPFNYCMVDPCQNAQCPLYPSATCTADRCGGCHANFTFRGKSLTDDDCNIQPRCPPLVD
PAALVTFSWDCTLKQDVGSHCTLSCPEGQVLHGVGSKVAICQPNQQWSIDVSNASCGAPV
SVCPPDQPLVYCFVPPCLFAECPAFPQAKCGADQCGDCSHDFYLGPPPPPCLFAECPAFP
QAKCVADQCGGCSHDFYLGGTKLTSEQCTIQTPPRCPPLVDPAALISFQYDCTLKQDVGS
VCTLSCPKGQDLIGVGLKVVTCQANQKWSVDISYARCATPIRVCPADEPLVNCYVDPCHT
GAKCPAFPQAKCVSNYCGGCNFDFYLGDTKLTRKQCIPDDTPQCIFNCKYARCPRFPSAI
CKMGCGCRRRFYNPTTLQPVQCY

Nucleotide sequence

Length: 1,410

>Phmamm.CG.MTP2014.S241.g05981.02.t
CTCTTCTTTCCTTTACTGCATTGGTCTACTCGCAAATTGCTGATCCCCGGTGTCCAGTAC
CAAACGGGATTGGATCATGCGGAATGTGCGGAATCTGCTCACAGGGGCAAATTTGCTGCC
CAAATGGATGTGGATCAAGTTGTATGCCGGTTCCCAGTGGACCCCAAGACCTCTGTCCTG
TAGACAGGCCTTTTAACTATTGCATGGTCGACCCGTGCCAGAATGCCCAGTGTCCATTGT
ACCCATCAGCTACTTGTACAGCCGATCGATGTGGAGGATGTCACGCAAACTTTACATTTC
GTGGAAAGAGTTTAACAGACGACGATTGCAACATCCAACCCCGTTGTCCACCATTGGTTG
ATCCTGCCGCGTTAGTTACGTTTTCATGGGACTGCACTCTCAAGCAAGACGTTGGGTCAC
ATTGCACTTTATCCTGTCCTGAGGGCCAAGTTCTCCATGGTGTGGGATCAAAAGTGGCAA
TCTGTCAACCCAACCAGCAATGGAGTATTGATGTTTCTAATGCCAGTTGTGGAGCTCCTG
TGAGTGTGTGTCCCCCAGACCAGCCATTGGTATATTGCTTCGTACCACCATGTCTTTTTG
CTGAATGTCCAGCTTTTCCTCAAGCAAAATGCGGTGCTGATCAGTGCGGTGATTGCAGTC
ATGACTTCTATTTGGGCCCCCCCCCCCCACCATGTCTTTTTGCTGAATGTCCAGCTTTTC
CTCAAGCAAAATGCGTTGCGGATCAGTGCGGTGGTTGCAGTCATGACTTCTATTTGGGAG
GAACTAAACTGACCAGCGAGCAATGCACAATTCAAACACCACCCCGTTGTCCACCATTGG
TTGATCCTGCTGCGCTGATTTCTTTCCAATATGACTGTACTCTCAAGCAAGATGTCGGCT
CAGTTTGCACTCTGTCCTGTCCAAAGGGTCAAGACCTCATTGGTGTAGGATTGAAAGTTG
TTACTTGTCAAGCCAACCAGAAATGGAGTGTGGACATTTCATACGCCCGTTGCGCAACTC
CAATCCGTGTATGTCCTGCCGATGAGCCACTGGTCAATTGTTATGTCGATCCGTGTCATA
CCGGAGCCAAATGCCCAGCTTTTCCACAAGCCAAGTGTGTTTCCAATTACTGCGGAGGTT
GCAATTTTGACTTCTATTTGGGCGACACCAAACTGACCCGCAAGCAATGCATACCTGACG
ATACTCCACAATGCATATTTAACTGCAAATACGCAAGGTGTCCTCGTTTTCCATCGGCAA
TTTGTAAGATGGGTTGCGGTTGCAGACGCAGGTTTTACAATCCGACAACCCTGCAACCAG
TCCAATGTTATTAAATTTCCTGGTAATTTTTTTGTTCACTTTACAACATGAATGAAGCCG
TTTTTGCGATATACGTATGTAATAAATTAC

InterProScan

ProSiteProfiles
Sushi_SCR_CCP_dom (IPR000436) - T[113-178] 7.578 - T[274-339] 7.557
SUPERFAMILY
Sushi/SCR/CCP_sf (IPR035976) - T[114-168] 1.53E-5 - T[276-338] 1.26E-5
SMART
Sushi_SCR_CCP_dom (IPR000436) - T[115-176] 0.0045 - T[276-337] 0.16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value