- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S242.g06002.01.t
Possible name(s)
FBN2; MATN2; MATN4
Gene model
Location
S242 [91,960 / 113,939]
Amino acid sequence
Length: 2,024
>Phmamm.CG.MTP2014.S242.g06002.01.p
MLVAMVAIARAQEAVPTDEPTETPPPVPVRCTAGIDLQFIIDSSSSVGEDNFQLVREFVR
NLVTDIQVGENAARVSVARYNSWVDSMFFLNTMYEKAAVLDAISNIPYYGRGTRTAQALD
VVTNHHLQAYSGWREQQVPTVVIVLTDGRSQDSEKLEESARRLRAKATRVIAIGVGNAVR
AELVQIATQPAEQNVIVVDDFTELQAQVDPILEKVCEVANDVNECLELNGGCSQICVNTF
NSFYCECMSGYTLGVDQATCVDVNECADDNGGCSDTCNNADGTYSCSCPPGRIPAGDGKT
CVDDSCFGNNECDQVCVNIVDGTFECRCRNGYTMGEDGITCLDVNECMVNNGGCEGTCNN
TMGSYVCICPDGMGLRPDGKTCGVMCYTCNHVTSNEECLDATICAPNQKSCQTTTRRENG
VLYISKMCKQTEACANNFIQNPKTAWSPTQCNIQPDGSSVCRCCCHESLCNIPGDCTLAD
TIDIECPDPMSLELPAGMNMTCTGGPSYQVGDVCTLTCPPGYGPVGGSSELVCTQRPRTI
EGFWNGIIGECGDINECANNNGGCSHTCTNLNGSYECSCPGDTPCSSQLLDLFFILDSSS
SVGTANFNLMMDFVANAVAELNIGQDDTRVGIMTYNKLSTKRFDFNVPMNNSHIQNLIAA
IEYSGRGTHTAKAIQAAVQECFGEAQGRRAGVPLAVVIVTDGRSQDYMNLPDAVKRLHEA
ADQVFAIGVTNRVRESELLQIAGDNVANYIMVDNFAALDASLVATLNSKVCTQPEQALTL
ASDLHTCDFDECSIDNGGCSDICVNTVGSFYCMCPDGQSLVEDGLTCDTNECLIDNGGCA
DKCINKLGTFTCLCGPAFVPAGVLCDDYNECLDENGGCSHVCVNFEGEVDSCYNQQRPFQ
CAQLCTNIPDGSYVCSCEPGYYLEEDAHNCTEINECDVSNGGCEHICTNTPGSYICECPA
GLQLRDDGRTCGVICYTCQNVLSNEECNTAVACPYSQDACFTTMRKRNNITRITKGCQQT
LACINNLIQNPRDSGEGPSQCNPESFHSKCECCCTESLCNSGLCPYNFSLPGCPSFERED
VIFRGLQSNGEVFPGGMAIVQCAEGYTYSQAGAAPTQLNCNYNFVNNTAAWDGNPEDLDV
CVDIDECAINNGGCVAPATCVNLPGSYECVCPDEPADYQLIDGVICERDECADPDIGGCS
HNCTNTVGSYICFCPPGWSLVEDGLTCDPNECQDGNAGCSEVCVNTLGGYFCRCHNEEAS
VLAEDGHTCVDVDECLTENGGCSHICTNLVPGYECSCPEGMLLNADGLNCRDDPCFINNG
GCSHICTEGVNGTVICSCPPGYISLDDGSCLDINECEDNNGGCQYNCTNFDGGYTCECPV
GQGLAGDGKSCGRACFSCEGAADNDECNAQPMEVCPPDADSCENEVRVNDGRTQIFKRCK
QTKSCNNNFIQNPRTAWMPSQCNNADQNDVCRCCCSGHLCNFNEKPCASANPCNVKQADV
VIVVDSSSSVKFDNFQKMKSFTNALFNTFNLGQDKVHSALVRYNKDVDERFNFLTANNKM
DVNDGVSAMPYMGSGTRTGLALQYVADNIFKSENGARDGVPKIVITLTDGRAQDDPAPPS
EQLRAMGAITFAIGIGTSLNQAQLNDIGGTPEHVFIAETFEALGGIVLNEVQRAVCYDRN
ECETSNGGCSHVCTNTQGSFACSCPEDMQLSEDLLTCIPLSNLTRIAVDECAVNNGGCAH
TCVDSLIGYNCTCDAGYVLGPDMHHCLDDDECANSACSHECVNTIGSYFCQCPETHVMDI
DFTTCLPRPGPADCLNGSMALGHSCMRATEESYDYAGAEGACGIDGGRLVKVNDMGVKIN
IERHLGGDKWIGLSDRVEEGVWVHSDGTPFTYTDGWGVDQPGNGDCGSLNNMIYASICLS
EKMAVCEIPRANGIMVFTRTWPNGAQGKLYMPTDVNMVMVTFPRSVKNVNAWYGSVSQKV
SSTQYVIMQNDVDRQSGMGQVEFVIDMGNERFPNYAVNIQPYEP
Nucleotide sequence
Length: 6,075
>Phmamm.CG.MTP2014.S242.g06002.01.t
ATGTTGGTCGCAATGGTGGCCATTGCTCGTGCACAGGAAGCCGTGCCTACAGACGAGCCC
ACTGAAACACCACCACCGGTTCCTGTTCGGTGCACAGCTGGCATTGATTTGCAGTTTATT
ATCGATTCTAGCAGTTCTGTCGGCGAAGATAACTTCCAACTTGTTCGTGAATTCGTCCGC
AACTTGGTGACCGACATCCAAGTAGGAGAGAACGCAGCACGTGTTTCAGTTGCACGTTAC
AACTCCTGGGTTGATTCCATGTTCTTTTTAAACACTATGTACGAGAAAGCTGCCGTTTTG
GACGCCATTTCCAACATTCCCTACTACGGCCGTGGAACCAGGACCGCCCAGGCCCTCGAT
GTTGTTACCAACCATCATCTTCAGGCTTACAGCGGATGGAGGGAACAACAGGTCCCTACT
GTGGTTATCGTGCTTACTGACGGAAGATCACAGGACTCTGAGAAACTTGAGGAATCTGCA
CGTAGACTTAGAGCCAAGGCCACCCGAGTGATCGCCATTGGTGTCGGAAACGCTGTGCGT
GCTGAGCTTGTCCAAATCGCCACTCAGCCTGCTGAGCAAAACGTCATTGTCGTAGATGAT
TTCACAGAATTGCAGGCACAAGTTGACCCAATTCTGGAAAAAGTCTGCGAAGTGGCCAAT
GATGTTAACGAGTGCTTGGAACTCAACGGCGGATGTTCCCAAATTTGCGTCAACACCTTC
AACAGCTTTTACTGCGAGTGCATGTCCGGTTACACTCTTGGAGTTGACCAAGCTACCTGT
GTTGATGTGAATGAATGCGCTGACGACAATGGCGGATGCAGCGACACATGCAACAACGCT
GACGGAACCTACAGCTGCTCCTGCCCACCAGGAAGGATCCCCGCTGGAGACGGAAAGACA
TGCGTTGATGACAGCTGCTTCGGAAACAACGAATGTGACCAAGTTTGTGTGAACATTGTC
GATGGAACATTTGAGTGCCGATGCCGGAATGGATACACCATGGGTGAAGATGGCATCACT
TGCTTGGATGTCAACGAATGTATGGTTAACAACGGAGGCTGCGAAGGCACCTGCAACAAC
ACCATGGGAAGCTATGTCTGCATCTGCCCAGATGGTATGGGTCTTCGCCCAGACGGCAAA
ACATGCGGTGTTATGTGCTACACTTGCAACCATGTCACATCCAACGAAGAATGTCTTGAT
GCTACCATTTGCGCACCAAACCAGAAATCTTGCCAAACCACCACTCGTCGTGAGAACGGA
GTCCTTTACATCAGCAAGATGTGCAAACAGACTGAGGCATGTGCCAACAACTTCATCCAG
AATCCTAAGACTGCATGGTCCCCAACACAATGCAACATCCAACCGGACGGTAGCTCTGTG
TGCCGATGCTGTTGCCACGAATCACTCTGCAACATCCCAGGAGACTGCACTCTTGCCGAT
ACCATCGACATTGAATGCCCAGACCCAATGTCCCTTGAACTGCCAGCTGGCATGAACATG
ACTTGCACTGGAGGACCATCCTACCAGGTTGGAGATGTTTGCACATTGACCTGCCCACCA
GGGTACGGACCAGTCGGTGGATCAAGCGAGCTTGTTTGCACACAAAGACCACGAACAATT
GAAGGATTCTGGAACGGAATCATCGGAGAATGCGGAGACATCAACGAATGCGCTAACAAC
AACGGCGGATGCTCACACACCTGCACCAACCTTAACGGTTCATACGAATGCTCCTGCCCT
GGTGATACTCCATGCTCCAGCCAACTTCTTGATCTTTTCTTCATCCTTGACTCTTCCAGC
TCCGTGGGAACAGCCAACTTCAACCTTATGATGGACTTCGTTGCCAACGCTGTTGCTGAG
CTTAACATCGGCCAAGACGACACCAGAGTCGGAATCATGACTTACAACAAATTGTCAACC
AAGAGATTTGACTTCAACGTGCCAATGAACAACTCCCACATTCAAAACTTGATTGCCGCC
ATTGAATACTCCGGACGTGGTACACACACTGCCAAAGCCATCCAAGCTGCAGTTCAAGAA
TGTTTCGGTGAGGCTCAAGGTCGACGTGCCGGAGTCCCATTGGCTGTTGTCATTGTTACC
GATGGTCGTTCCCAAGACTACATGAACCTTCCCGATGCCGTTAAGCGCCTGCACGAAGCT
GCTGATCAGGTCTTCGCCATTGGTGTCACCAACCGTGTCCGTGAAAGCGAACTTCTCCAG
ATTGCTGGCGACAACGTTGCAAACTACATCATGGTCGACAACTTCGCTGCCCTCGATGCT
TCCCTTGTTGCCACTCTTAACTCTAAAGTGTGCACACAACCCGAACAAGCCCTGACTCTT
GCTTCTGACCTCCACACCTGCGACTTCGATGAGTGCTCCATCGATAACGGTGGCTGCAGT
GATATTTGTGTCAATACCGTCGGTTCATTCTACTGCATGTGCCCAGACGGCCAATCCCTT
GTCGAAGATGGACTTACATGCGACACCAATGAGTGTTTGATCGACAATGGTGGTTGCGCC
GACAAGTGCATCAACAAGCTCGGAACATTCACATGTCTTTGCGGACCTGCATTCGTCCCT
GCTGGAGTCCTTTGCGACGATTACAATGAGTGCCTTGATGAGAATGGCGGTTGCTCTCAC
GTTTGTGTCAACTTCGAAGGAGAGGTTGACAGCTGCTACAACCAACAACGGCCATTCCAA
TGCGCACAGCTTTGCACTAACATCCCAGACGGATCATACGTGTGCTCATGCGAGCCCGGA
TACTACTTGGAAGAAGATGCACACAACTGCACAGAAATCAATGAGTGTGATGTATCAAAC
GGTGGATGCGAACATATCTGTACCAACACACCAGGATCATACATTTGCGAGTGCCCAGCT
GGTCTTCAACTTCGTGACGACGGCCGTACCTGCGGTGTGATCTGCTACACTTGCCAGAAC
GTTCTCTCCAACGAAGAGTGCAACACCGCTGTTGCCTGCCCATACTCTCAAGATGCTTGC
TTCACCACTATGCGTAAGCGTAACAACATTACTCGTATCACCAAGGGATGCCAACAGACT
TTGGCTTGCATCAACAACCTTATCCAGAACCCACGTGACTCTGGCGAAGGACCATCCCAG
TGCAACCCAGAATCTTTCCACTCTAAATGCGAGTGCTGCTGTACCGAATCACTCTGCAAC
TCTGGACTCTGCCCATACAACTTTTCTCTGCCCGGATGCCCATCATTCGAACGTGAGGAT
GTTATCTTCCGTGGACTTCAATCAAACGGCGAAGTTTTCCCTGGTGGAATGGCGATTGTG
CAGTGTGCCGAGGGTTACACCTACTCGCAAGCTGGAGCTGCACCTACACAACTGAACTGC
AACTACAACTTTGTTAACAACACTGCAGCATGGGACGGCAACCCCGAAGACTTGGACGTC
TGCGTCGACATTGACGAATGCGCAATCAACAACGGTGGATGCGTTGCACCAGCAACATGC
GTTAACCTGCCAGGCAGCTACGAATGCGTTTGTCCAGACGAGCCAGCTGATTACCAACTC
ATCGATGGAGTCATCTGCGAACGTGATGAGTGCGCTGACCCAGACATAGGAGGTTGCTCA
CACAACTGCACCAACACCGTAGGAAGTTACATCTGTTTCTGTCCACCTGGATGGTCTCTC
GTCGAAGATGGACTCACTTGCGACCCCAACGAGTGCCAAGACGGTAACGCAGGATGCAGT
GAAGTGTGTGTCAACACCCTTGGCGGATATTTCTGCAGATGTCACAACGAAGAAGCATCT
GTCCTTGCTGAAGATGGCCATACTTGCGTTGATGTTGATGAGTGCTTGACTGAAAATGGC
GGTTGCTCCCATATTTGCACCAACTTGGTACCCGGATACGAATGCTCTTGCCCAGAAGGC
ATGCTTCTGAACGCTGATGGCCTTAACTGCAGAGACGACCCATGCTTCATCAACAACGGT
GGATGCTCACACATTTGTACCGAAGGCGTCAACGGCACAGTTATCTGCTCTTGCCCACCA
GGTTACATTTCCTTGGATGACGGAAGCTGCCTTGACATCAACGAGTGTGAAGACAACAAC
GGAGGTTGCCAATACAACTGCACCAACTTCGATGGTGGATACACTTGCGAATGCCCAGTC
GGACAAGGTCTTGCTGGAGATGGAAAGAGCTGTGGACGTGCTTGCTTCTCATGCGAGGGT
GCTGCCGACAACGACGAATGCAATGCTCAACCAATGGAGGTTTGCCCACCTGATGCAGAC
TCTTGCGAAAACGAGGTCCGTGTAAACGATGGCCGTACACAGATCTTCAAGAGATGCAAA
CAGACCAAATCATGCAACAACAACTTTATCCAGAACCCACGTACCGCTTGGATGCCAAGC
CAGTGCAACAATGCCGACCAGAACGACGTTTGCCGTTGTTGCTGCTCTGGACATCTTTGC
AACTTCAACGAGAAACCATGTGCTTCTGCCAATCCTTGCAACGTGAAACAGGCCGATGTT
GTCATCGTGGTCGATTCATCCAGCTCAGTGAAGTTCGACAACTTCCAAAAGATGAAATCT
TTCACCAATGCTCTTTTCAATACCTTCAACTTGGGGCAAGACAAGGTTCACTCTGCTCTT
GTCAGATACAACAAAGACGTTGATGAGAGATTCAACTTCCTTACCGCCAACAACAAGATG
GACGTCAACGACGGAGTCTCTGCTATGCCATACATGGGCAGCGGAACCAGAACCGGTTTG
GCTCTCCAATACGTTGCCGACAACATCTTCAAGTCGGAAAATGGTGCCAGAGACGGCGTA
CCAAAGATTGTCATCACTCTTACTGATGGACGTGCACAGGACGATCCCGCACCACCAAGT
GAGCAACTTCGTGCCATGGGAGCCATCACCTTCGCCATTGGTATCGGTACCTCACTCAAC
CAGGCTCAGCTTAACGACATTGGTGGTACACCAGAACATGTTTTCATCGCCGAGACTTTC
GAAGCTTTGGGAGGAATCGTCTTAAACGAAGTGCAACGCGCTGTATGCTACGACCGCAAC
GAGTGCGAGACCAGCAACGGTGGATGCTCTCACGTCTGCACCAACACCCAAGGTTCTTTC
GCCTGCTCTTGCCCAGAAGACATGCAACTGAGCGAGGACCTTCTTACTTGCATCCCACTC
TCCAACTTGACCAGAATTGCAGTCGATGAGTGCGCTGTAAACAATGGAGGATGTGCACAT
ACTTGTGTCGATTCCTTGATCGGCTACAACTGCACTTGTGATGCTGGATACGTTCTGGGA
CCAGACATGCACCACTGTCTTGATGATGACGAGTGCGCAAACTCTGCTTGCTCACACGAG
TGCGTTAACACCATCGGATCTTACTTCTGTCAGTGCCCAGAAACTCACGTGATGGATATT
GATTTCACAACTTGCTTACCACGACCAGGACCCGCCGACTGCTTGAATGGCTCCATGGCT
CTTGGACACAGCTGTATGCGTGCCACTGAAGAATCTTATGACTACGCTGGAGCCGAAGGT
GCTTGTGGTATCGATGGTGGCCGTCTTGTCAAGGTCAACGATATGGGAGTGAAGATTAAC
ATTGAACGCCACTTGGGAGGCGACAAATGGATCGGTCTGTCTGATCGCGTCGAGGAAGGC
GTTTGGGTTCACTCAGATGGAACTCCATTCACTTACACTGACGGATGGGGTGTGGATCAA
CCAGGAAACGGAGACTGCGGTTCATTGAACAATATGATCTATGCTTCCATCTGCCTGAGC
GAAAAGATGGCCGTATGCGAAATCCCACGTGCCAATGGCATTATGGTTTTCACCCGAACA
TGGCCCAATGGTGCTCAGGGTAAACTCTACATGCCCACAGATGTCAACATGGTCATGGTT
ACTTTCCCTAGATCAGTCAAGAATGTAAACGCTTGGTACGGATCTGTGTCCCAGAAGGTG
TCTTCCACCCAATACGTGATCATGCAAAACGACGTCGACAGGCAGAGCGGCATGGGACAA
GTTGAGTTTGTCATTGACATGGGCAACGAACGCTTCCCTAACTACGCTGTGAACATCCAG
CCATACGAGCCTTAA
| Gene3D |
vWFA_dom_sf (IPR036465) - T[26-225] 9.3E-49 - T[590-787] 7.8E-44 - T[1496-1686] 1.4E-50 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[31-218] 7.72E-50 - T[560-771] 4.62E-44 - T[1483-1667] 2.5E-49 |
| SMART |
VWF_A (IPR002035) - T[34-216] 1.3E-35 - T[589-763] 1.1E-29 - T[1497-1668] 3.4E-38 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[36-215] 31.509 - T[591-766] 27.652 - T[1499-1671] 29.889 |
| Pfam |
VWF_A (IPR002035) - T[36-206] 1.6E-39 - T[591-759] 1.9E-33 - T[1499-1666] 6.5E-41 |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[220-347] 4.55E-13 - T[788-931] 5.81E-10 - T[1140-1271] 1.1E-9 - T[1269-1393] 1.46E-13 - T[1675-1812] 1.43E-13 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[221-261] 7.881 - T[302-342] 7.905 - T[343-383] 6.616 - T[788-828] 7.192 - T[932-972] 8.247 - T[1143-1187] 11.801 - T[1271-1311] 8.23 - T[1352-1392] 7.482 - T[1727-1767] 8.311 - T[1768-1806] 8.691 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[221-261] 1.1E-9 - T[262-302] 2.3E-7 - T[304-342] 0.036 - T[343-383] 6.6E-6 - T[553-586] 0.0074 - T[788-825] 9.1E-5 - T[828-866] 2.6E-4 - T[888-931] 4.4E-4 - T[932-972] 1.8E-7 - T[1143-1187] 1.4E-6 - T[1189-1228] 1.7E-5 - T[1230-1270] 0.026 - T[1271-1311] 4.5E-8 - T[1352-1392] 2.4E-4 - T[1678-1718] 1.3E-6 - T[1727-1767] 5.0E-5 - T[1768-1806] 2.0E-6 |
| SMART |
EGF-like_dom (IPR000742) - T[224-261] 8.1E-5 - T[265-302] 0.0065 - T[305-342] 0.27 - T[346-383] 0.015 - T[556-586] 35.0 - T[791-828] 0.0055 - T[831-866] 3.7 - T[870-931] 4.2 - T[935-972] 8.8E-4 - T[1146-1187] 0.025 - T[1190-1228] 1.3E-5 - T[1231-1270] 7.1 - T[1274-1311] 1.9E-4 - T[1314-1351] 0.027 - T[1355-1392] 0.68 - T[1681-1718] 8.1E-4 - T[1730-1767] 8.2E-5 - T[1771-1806] 0.03 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[236-247] . - T[358-369] . - T[803-814] . - T[947-958] . - T[1160-1171] . - T[1286-1297] . - T[1367-1378] . - T[1742-1753] . - T[1781-1792] . |
| Pfam |
cEGF (IPR026823) - T[242-265] 7.5E-7 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[245-260] . - T[326-341] . - T[915-930] . - T[1212-1227] . - T[1751-1766] . |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[262-286] . - T[343-367] . - T[553-577] . - T[932-956] . - T[1143-1169] . - T[1352-1376] . - T[1768-1790] . |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[307-341] 0.0043 - T[553-580] 0.0013 - T[828-859] 3.6E-4 - T[1143-1173] 6.9E-7 - T[1228-1256] 0.002 - T[1352-1391] 0.0032 - T[1768-1803] 0.0027 |
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[484-553] 9.245 - T[1071-1143] 5.786 |
| CDD |
Sushi_SCR_CCP_dom (IPR000436) - T[486-551] 5.77819E-4 |
| SMART |
Sushi_SCR_CCP_dom (IPR000436) - T[486-551] 5.8E-5 - T[1073-1141] 15.0 |
| SUPERFAMILY |
Sushi/SCR/CCP_sf (IPR035976) - T[486-554] 1.43E-6 |
| Gene3D |
C-type_lectin-like/link_sf (IPR016186) - T[1804-1932] 2.2E-15 |
| SUPERFAMILY |
CTDL_fold (IPR016187) - T[1805-1930] 4.55E-18 |
| SMART |
C-type_lectin-like (IPR001304) - T[1814-1927] 1.4E-6 |
| ProSiteProfiles |
C-type_lectin-like (IPR001304) - T[1821-1927] 11.828 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBN2_HUMAN | 27.083 % | 194 | 1.89E-49 |
| MATN2_HUMAN | 30.033 % | 247 | 3.07E-67 |
| MATN4_HUMAN | 34.358 % | 205 | 2.19E-55 |