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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.567.v2....'
  2. Transcript 'Cisavi.CG.ENS81.R14....'
  3. Clone 'AHC0AAA200YI09'
  4. Transcript 'Haaura.CG.MTP2014.S2...'
  5. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S243.g06007.02.t

Possible name(s)

ABCC1; ABCC2; ABCC4

Location

S243 [2,679 / 15,680]

Sequences

Amino acid sequence

Length: 1,190

>Phmamm.CG.MTP2014.S243.g06007.02.p
MGWHIRAGTCALMYKKTLRLSQKALASATTGQIVNLGATDVIRFDWDLGASSLAGPVIMV
SIMVTQSCLGRGFGRIRAKMAVLTDQRIRTMNEVISAMRVIKMYTWEKPFENLIKEIRRK
EISKVLVSSIMKACNFSMIFVATRLLVFVTFSLFVALGGNLTSSKVFTAIGLFNVLRVTI
GIFFPNAIEKLSESLISMRRIQDFLLLDEFSTSVDASADNVEKSNASLEFNDFTASWTDK
THDEDLSMEHTLIDIQVKITSSKLFAVIGPVGAGKSSFLSAILRELKPTHGGLKVVGRVA
YVGQVPWIFSGTIRENILFGEPYDKLRYKEVIKSCSLDKDIKSLEKGDETLVGERGVTLS
GGQKARVNLARAAYRENIDIMLLDDPLSAVDSNVANHLFHECICGYMKDKIRVLVTHQLQ
FLSAADQIIILKHGSIDGQGTFGELQADGTDFAALLKTDEADEENKVASPTFLTPASSQY
FLHGDDDVLANGVFDHALSRGIVDTTSVADNAGVVNSPARTLSVKSLHHKSITSLDLAEP
LLDKDKAEFVASIEDEETRVQGSVGWKVYTEYLGTNKPLLFLLVILILSNHSLYLLCDWW
ISVWATQSDIFYSNFYTTITNGSLNTTQASGFSTTAVVTATSLLHLNSTYGAFPEVQFDD
SYYIMISGILTLLFIIVMYSRSLLQFYYTVVSGIKMHDSMFYAVLRAPIRFFDVNPVGRI
LNRFSKDMGQIDEILPLALMDFIYISFTILSIMLLAISINFFVLIVVIPLLAYFVWLRQY
YIKTSRDIKRMEGASSWFLFLTGSRWLAIRLDVLSSIFIGTVAFSSVLTASYLQTDAGKV
GLVLSYSIMLMGMFQWGVRQSAEMTSVERVQEYYRIPPEAPHEIPDQKPPADWPKYGIVT
FDNLSYAHYAGGPNVLHKIRLSVRAHEKVGVVGRTGAGKSSLISTLFRLNEYSSGEVYID
GLAISTLGLTDLRSAISIIPQDPILFAGTLRKNLDPFSVYIDHSLWDALEQVQLKSLIES
FPSKLECEVSEAGNNFSVGQRQLICLARAILRKNKILIVDEATANVDIRTDRLIQLTIRN
TFQHCTVMTVAHRINTVIDSDRVLVLENGRVVEFDEPHVLLSNTDGAFSKMVESIGKSEA
RELKDIARKVYDKTHSEGVSDDVDDADRSYLARFLPVPGSYDHLEVESNV

Nucleotide sequence

Length: 3,573

>Phmamm.CG.MTP2014.S243.g06007.02.t
ATGGGTTGGCACATACGAGCTGGCACATGTGCACTTATGTACAAAAAGACTTTGCGATTG
AGTCAAAAAGCTCTTGCTAGTGCAACAACTGGACAAATAGTAAATCTTGGTGCAACTGAT
GTTATACGGTTTGATTGGGACTTGGGTGCATCTTCATTGGCTGGACCAGTGATAATGGTT
TCTATTATGGTGACTCAAAGCTGCCTTGGAAGAGGATTTGGTCGCATTCGAGCTAAGATG
GCTGTTCTTACTGACCAGCGTATAAGAACCATGAATGAAGTGATTTCTGCTATGCGTGTT
ATTAAAATGTACACATGGGAAAAGCCATTTGAAAACCTTATTAAGGAAATTCGAAGAAAA
GAAATTAGCAAGGTTCTTGTTTCCTCCATAATGAAAGCTTGCAACTTTTCCATGATATTT
GTGGCTACTCGTCTTTTGGTGTTCGTCACCTTCTCACTCTTTGTTGCACTTGGAGGGAAT
CTGACGTCATCCAAGGTATTTACTGCCATCGGTCTATTCAATGTTCTTCGGGTGACCATC
GGGATTTTCTTTCCTAATGCCATTGAAAAGTTGTCCGAATCTCTTATTAGCATGAGGAGA
ATTCAGGATTTTCTTCTACTGGACGAATTCTCAACTTCTGTCGATGCCAGTGCGGATAAT
GTTGAAAAATCAAACGCGAGTCTGGAATTTAATGATTTCACGGCATCTTGGACAGATAAA
ACCCATGACGAGGATTTGTCGATGGAACACACATTAATCGACATCCAGGTGAAAATCACA
TCGTCAAAACTGTTTGCCGTTATTGGACCCGTCGGTGCTGGAAAGTCTTCCTTCTTGAGC
GCGATCTTGCGGGAGCTTAAACCGACACACGGCGGTCTTAAAGTGGTCGGTCGTGTCGCT
TACGTCGGTCAGGTGCCGTGGATTTTCTCAGGAACCATACGGGAAAACATTTTGTTCGGT
GAACCTTACGACAAACTTCGTTACAAAGAAGTTATCAAGTCATGCTCATTGGATAAAGAC
ATTAAATCTCTTGAAAAAGGCGATGAAACATTGGTTGGTGAGCGTGGGGTTACACTTAGT
GGGGGCCAGAAAGCCAGGGTGAATCTTGCAAGAGCCGCGTACCGAGAAAATATCGACATC
ATGTTGTTGGATGATCCACTGAGCGCAGTTGATTCGAATGTTGCAAATCATCTCTTCCAC
GAATGCATTTGTGGATATATGAAAGACAAGATCCGGGTTCTTGTGACACATCAGCTTCAG
TTTTTGTCAGCAGCCGACCAAATTATCATTTTGAAGCATGGCTCAATAGACGGTCAAGGA
ACGTTTGGTGAGTTACAAGCAGACGGAACTGACTTCGCAGCTTTGCTAAAAACCGATGAG
GCCGATGAAGAAAACAAGGTGGCGTCGCCCACTTTTCTCACTCCTGCTTCTTCACAATAC
TTCTTGCATGGCGACGATGACGTATTAGCCAACGGAGTTTTTGATCATGCACTATCAAGG
GGAATTGTGGACACGACGTCAGTTGCTGACAATGCAGGAGTTGTTAATTCGCCTGCAAGG
ACATTAAGCGTTAAAAGTTTGCATCACAAGTCTATAACGAGCCTAGACTTAGCCGAGCCA
CTCCTGGACAAAGATAAGGCGGAATTTGTAGCAAGCATTGAGGATGAGGAAACTCGTGTG
CAGGGAAGTGTTGGTTGGAAGGTTTATACTGAATACTTAGGAACCAACAAACCCCTCTTG
TTTTTGCTCGTTATCCTTATACTTTCCAATCATTCTTTATATCTCCTCTGTGATTGGTGG
ATATCTGTCTGGGCCACCCAGTCTGACATTTTTTACTCTAACTTTTATACAACCATTACC
AACGGCTCTCTAAACACCACACAAGCATCAGGTTTCAGCACAACCGCTGTAGTCACTGCT
ACCTCATTACTTCATTTAAATTCCACCTACGGTGCTTTCCCTGAGGTGCAATTTGATGAC
AGTTATTACATCATGATTTCTGGAATCCTCACGTTACTGTTCATCATCGTAATGTACTCT
CGATCACTCCTACAATTCTACTACACTGTCGTATCTGGAATCAAAATGCATGACAGTATG
TTTTATGCCGTCTTGCGAGCTCCCATACGATTTTTCGACGTCAATCCCGTTGGTCGGATT
TTAAATCGTTTTTCAAAGGACATGGGACAAATTGATGAAATTTTACCGCTTGCTTTGATG
GATTTTATATACATAAGCTTTACCATTCTTTCCATCATGCTTCTCGCCATTAGTATTAAC
TTCTTCGTGCTGATCGTGGTGATTCCCCTTCTCGCGTACTTCGTATGGTTACGTCAGTAT
TATATTAAGACCTCGCGCGACATCAAGCGTATGGAGGGCGCTAGTTCTTGGTTTCTATTT
CTTACTGGCTCTCGGTGGCTTGCTATCAGACTTGACGTACTGAGTTCAATTTTCATCGGC
ACTGTTGCCTTCTCATCAGTTCTCACTGCTTCATACCTCCAAACCGATGCTGGAAAGGTC
GGCTTGGTTTTATCTTACTCCATAATGTTGATGGGAATGTTCCAATGGGGAGTTCGTCAG
AGCGCCGAGATGACGTCAGTGGAGCGAGTCCAGGAGTATTACAGGATTCCGCCTGAGGCT
CCGCACGAAATTCCAGACCAGAAGCCGCCTGCTGATTGGCCCAAATACGGCATCGTCACA
TTCGATAACCTGTCGTACGCACATTACGCTGGTGGACCGAATGTATTGCATAAGATTCGC
CTCAGCGTCCGAGCTCATGAAAAGGTGGGCGTAGTTGGTCGCACGGGGGCGGGAAAGAGC
TCTCTTATATCGACGCTCTTCCGCCTAAACGAGTACTCGTCAGGCGAAGTTTACATCGAC
GGATTGGCGATTTCCACTCTTGGTCTTACAGATTTGCGTTCAGCAATCTCAATCATTCCC
CAGGATCCAATTCTGTTTGCCGGAACTTTACGCAAGAATCTCGATCCATTTTCAGTTTAC
ATTGACCATTCACTGTGGGATGCTTTAGAACAGGTTCAGTTGAAATCGTTGATTGAAAGT
TTTCCGTCCAAGCTTGAGTGCGAAGTGTCAGAGGCTGGAAACAACTTCAGTGTCGGGCAA
CGTCAGCTAATATGTCTCGCTCGAGCAATTCTCAGGAAGAATAAAATTCTCATCGTCGAC
GAAGCAACCGCTAATGTTGACATCAGGACGGACCGACTTATTCAGTTGACAATACGAAAC
ACATTCCAACATTGCACAGTTATGACTGTAGCGCATAGAATCAACACCGTCATTGACTCC
GACCGCGTTCTGGTGTTAGAAAATGGGCGAGTGGTAGAGTTTGACGAACCCCACGTTCTT
TTATCAAATACTGATGGCGCGTTCTCAAAAATGGTCGAGTCAATTGGCAAAAGCGAAGCC
CGAGAGCTGAAAGATATCGCTCGAAAGGTATATGACAAAACGCACAGTGAAGGAGTTAGC
GATGACGTGGACGATGCTGATCGATCGTACCTGGCTCGATTTTTGCCTGTCCCTGGCTCA
TACGATCATTTAGAAGTCGAGTCAAATGTTTAA

InterProScan

PANTHER
ABCC4 (IPR030240) - T[2-45] 0.0 - T[47-794] 0.0 - T[795-1150] 0.0
SUPERFAMILY
ABC1_TM_sf (IPR036640) - T[4-205] 5.76E-13 - T[655-885] 1.31E-28
Gene3D
ABC1_TM_sf (IPR036640) - T[41-202] 2.7E-7 - T[552-799] 4.8E-16
ProSiteProfiles
ABC1_TM_dom (IPR011527) - T[52-192] 14.816 - T[663-790] 17.843
Pfam
ABC1_TM_dom (IPR011527) - T[52-177] 2.4E-12 - T[632-790] 3.8E-16
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[224-457] 1.47E-49 - T[890-1133] 1.16E-66
ProSiteProfiles
ABC_transporter-like (IPR003439) - T[228-458] 21.309 - T[899-1133] 17.134
Pfam
ABC_transporter-like (IPR003439) - T[254-387] 3.8E-16 - T[916-1064] 3.8E-27
SMART
AAA+_ATPase (IPR003593) - T[261-435] 8.8E-9 - T[925-1110] 2.5E-11
ProSitePatterns
ABC_transporter_CS (IPR017871) - T[359-373] . - T[1036-1050] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MRP1_HUMAN 34.07 % 629 0
MRP2_HUMAN 34.647 % 669 0
MRP4_HUMAN 44.354 % 1000 0