- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C3.616.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S243.g06008.01.t
Possible name(s)
ABCC11; ABCC4; ABCC5
Gene model
Location
S243 [24,164 / 29,124]
Amino acid sequence
Length: 646
>Phmamm.CG.MTP2014.S243.g06008.01.p
MNELLVAMRIVKLYAWEKRFADLVSNIRKKEINWILKSSYLKAYNSGMTYASGKILVFAT
FVTYVVLGGELTAPKVFTVMAWFNSIRLPTTVFAHFAIEKIAESRISLKRIENFLLLEEL
KPDVEGGVQTEFEKPLIKLENYFGSWNANKSTSDTDISNLPHGDETLVGERGAALSGGQK
ARVNLARAAYRENIDIMLLDDPLSAVDANVANHIFHECICGYMKNKGEVVACGSFQDIQT
SGADLAYLTATNSDDQSENQHVEHPLRLYVPQFQEKQSSEKTNDEIYGTKVVLQKNVEHV
ADVENEEIKAQGSIGLKSATNSQDSLASLNTSTSSIFANRTMAVLNPQPISSDDFYYIRI
YASRILNRFSKDMGQVDEILPWLLLEFTMMTSVERIQQYHKIPPEASHNTGTSKLPVDWP
VAGDLLIQNASFAHYESGPTILCDISLHIKPMEKIGVVGRTGAGKSSLIASLFRLTELRS
GKIFLDNVDISTIGLTKLRSSISVITQVEMKETVAVLPVKLETKLAESGSNFSVGQRQLL
CLARAILTRNKILAIDEATANVDMRTDKLIQKTIRETFKDCTVITVAHRINTIIDSDRVL
VLDQGRLVEFDAPSKLLNNRDSAFSAMVDSLGSVESDNLRRLANDL
Nucleotide sequence
Length: 1,941
>Phmamm.CG.MTP2014.S243.g06008.01.t
ATGAACGAGCTGTTGGTTGCAATGCGAATTGTAAAGTTATATGCCTGGGAGAAACGATTC
GCTGATCTAGTCAGCAATATTCGAAAAAAGGAAATAAATTGGATTTTGAAATCGTCGTAC
TTGAAGGCTTACAATTCCGGTATGACGTATGCATCAGGAAAAATTCTTGTGTTTGCTACT
TTTGTGACTTACGTAGTTTTGGGCGGAGAGCTCACCGCACCAAAGGTTTTTACTGTAATG
GCATGGTTTAACTCTATTCGGTTGCCAACTACAGTGTTTGCACATTTTGCAATTGAGAAG
ATCGCTGAGTCGCGTATCAGCTTAAAACGAATCGAGAATTTTTTACTCTTGGAAGAATTA
AAGCCCGATGTGGAAGGTGGTGTCCAGACAGAGTTTGAAAAGCCATTAATAAAACTAGAG
AACTATTTTGGCAGTTGGAATGCGAATAAGTCGACGTCAGACACAGACATCAGTAACTTA
CCTCATGGCGACGAGACATTGGTTGGTGAGCGTGGGGCTGCACTTAGTGGGGGTCAGAAA
GCCAGGGTGAATCTTGCGAGAGCTGCGTACCGAGAAAATATCGACATCATGTTGTTGGAT
GATCCATTAAGCGCAGTTGATGCAAACGTTGCAAACCATATCTTCCATGAATGTATTTGC
GGCTATATGAAAAATAAGGGAGAAGTTGTAGCTTGTGGTTCATTTCAAGATATCCAAACC
AGTGGGGCCGATTTGGCCTACTTGACTGCTACAAACTCCGATGACCAAAGCGAGAATCAA
CACGTAGAACATCCATTAAGGCTTTATGTTCCACAGTTTCAGGAAAAACAATCTTCAGAG
AAGACCAACGACGAAATCTATGGAACAAAAGTCGTTTTGCAAAAGAACGTTGAGCACGTC
GCCGATGTTGAAAATGAGGAAATAAAGGCGCAGGGTAGCATAGGACTGAAGTCGGCAACT
AATTCCCAAGACAGTCTAGCATCTTTAAATACTTCCACGTCATCGATATTTGCCAATAGA
ACCATGGCAGTCTTAAATCCGCAACCAATATCGTCGGATGATTTTTACTACATACGGATA
TACGCAAGCAGAATTCTAAACCGTTTTTCGAAAGACATGGGACAAGTTGACGAAATTCTT
CCTTGGCTTCTTTTAGAGTTTACTATGATGACGTCAGTTGAGCGAATACAGCAATATCAC
AAAATTCCACCTGAAGCTTCGCACAACACTGGAACATCGAAGTTACCCGTTGACTGGCCA
GTTGCTGGTGACCTACTCATACAAAACGCCTCCTTTGCCCATTATGAGTCTGGACCGACG
ATTTTATGTGACATATCCCTACACATCAAGCCAATGGAAAAGATTGGAGTTGTTGGAAGA
ACTGGAGCTGGAAAAAGTTCTTTAATTGCAAGTTTGTTTCGTCTAACTGAACTCCGCTCT
GGTAAAATTTTTCTTGACAATGTCGATATTTCTACTATTGGTCTTACTAAACTACGATCT
TCGATTTCCGTTATTACTCAGGTTGAAATGAAAGAGACAGTGGCAGTTCTTCCTGTTAAA
CTGGAAACAAAACTGGCCGAATCCGGGTCTAACTTCAGCGTAGGGCAACGTCAACTGCTT
TGTCTTGCCAGAGCAATTTTAACGAGAAATAAAATTCTCGCAATCGACGAAGCAACTGCA
AATGTTGACATGAGAACGGATAAGTTAATTCAGAAAACAATCCGCGAAACCTTTAAAGAT
TGTACGGTCATCACTGTGGCTCACCGGATCAACACCATCATCGACAGTGATCGCGTTTTG
GTTCTAGATCAAGGACGATTGGTTGAATTCGACGCTCCAAGTAAACTGTTAAATAACAGA
GACAGCGCATTTAGTGCTATGGTTGATTCGCTGGGATCAGTGGAAAGTGACAATCTTCGA
CGATTGGCTAACGATTTGTAA
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[1-102] 13.07 |
| Pfam |
ABC1_TM_dom (IPR011527) - T[1-84] 1.2E-6 |
| PANTHER |
ABCC4 (IPR030240) - T[1-150] 2.0E-167 - T[155-229] 2.0E-167 - T[363-388] 2.0E-167 - T[389-507] 2.0E-167 - T[505-635] 2.0E-167 |
| Gene3D |
ABC1_TM_sf (IPR036640) - T[1-117] 1.2E-5 |
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[2-119] 2.09E-9 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[5-295] 9.157 - T[425-629] 16.053 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[152-239] 1.74E-15 - T[416-624] 2.27E-55 |
| Pfam |
ABC_transporter-like (IPR003439) - T[155-203] 1.1E-5 - T[444-508] 8.6E-13 - T[521-560] 1.8E-7 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[175-189] . - T[532-546] . |
| SMART |
AAA+_ATPase (IPR003593) - T[451-606] 4.3E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MRP5_HUMAN | 48.327 % | 239 | 1.69E-67 |
| ABCCB_HUMAN | 42.804 % | 220 | 6.14E-61 |
| MRP4_HUMAN | 50 % | 257 | 1.84E-73 |