- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S243.g06012.01.t
Possible name(s)
ABCC1; ABCC4; ABCC5
Gene model
Location
S243 [71,014 / 79,108]
Amino acid sequence
Length: 944
>Phmamm.CG.MTP2014.S243.g06012.01.p
MGWHLRAATCALMYKKLPKYALYIFVGPIVSIVFVILLWQVVGVSSLAGFLVIVIGFVGY
SLTGLCFGKFRYKTARRTDKRVRMMNEIVSAMRVVKMYAWEKPYASLIEKMRSLGIEYMA
ESMVSIRRIESFLLLEENATKTTKKSNLDEIKKNANSNSASIVFEEFTAAWNDVNLAYVT
ESGDATQTKTLENINLQVDDRKLLAVIGPVGSGKSSLLSAILSELPAKLGCVKVQGRIAY
VGQIPWVYSGSIKDNILFGEKYEPERFQAVVEACALTKDIQSFQSGEETLVGERGVTLSG
GQKARLSLARTAYRENIDIVLLDDPLSAVDSNVANHIFHQCIDGYLKNKGSISHSGTYEE
LLADGTDFAWLLKRGDDKTTKPVGAQRQVSLKTSDHLLVEHNKENGANNQAEFVADVREE
ELKAQGSIGWRSYADYLINNKFTFFLVVILLIINQTLYVLIDWWISQWSSAFESVEMNSM
HLGENVTNPDVTTSANVAIINNQFYILILTYILVGFIATIFMRYTLQMHHLLVSGKVMHD
KMLQSLFDAPIRFFDVNPVGAWYAFLTGSRWFGLRLDLIGAMFIGAVMFLSLITVTVTDL
NAGQMTSVERIQQYHNLPREAAHYISRTDKDLSNDWPSRGKIEFCNLSFAHYNGGPDVLH
EISLVILPREKVGIVGRTGAGKSSFISCLFRLNEFTSGKLMIDDVDVSKIGLTALRSSIS
VIPQDPILFAGTLRNNLDPFSAYSDFELWTALEKVLQQGRVVEFDAPHTLLGNCDSVFSN
MVEAFGESESKILRIGAKQVQMKETIEQFPSKLQIELAESGSNFSVGQRQLICLARAILR
KNTVLSIDEATANVDIRTDQLIQKTIRNTFHDCTVITVAHRINTIIDCDRVLVLQQGRVV
EFDAPHTLLGNRDSVFSNMVEAFGESESKILRIGAKQVQQAQTE
Nucleotide sequence
Length: 2,835
>Phmamm.CG.MTP2014.S243.g06012.01.t
ATGGGATGGCATCTTCGGGCGGCTACGTGCGCCCTTATGTACAAGAAGCTCCCAAAGTAT
GCATTGTATATCTTCGTCGGACCAATTGTATCTATTGTGTTTGTGATCCTTTTGTGGCAA
GTTGTGGGAGTTTCTTCTTTGGCTGGATTTCTCGTCATCGTCATAGGGTTTGTAGGTTAC
AGCCTCACTGGGCTTTGTTTTGGAAAATTTAGGTACAAAACCGCTCGACGCACTGACAAA
AGGGTCCGCATGATGAATGAAATCGTGTCAGCAATGCGGGTTGTGAAGATGTACGCTTGG
GAAAAGCCATACGCAAGTCTGATTGAAAAAATGCGAAGCTTGGGTATCGAATACATGGCT
GAATCTATGGTTAGCATAAGACGCATAGAGTCATTTCTTTTACTTGAAGAAAATGCTACA
AAAACTACAAAAAAATCGAATTTGGATGAAATTAAGAAAAACGCTAACAGTAACTCAGCA
AGCATTGTTTTTGAGGAGTTTACGGCTGCCTGGAATGACGTTAATCTCGCGTATGTTACA
GAAAGTGGAGACGCAACACAAACAAAGACGTTAGAAAATATCAACTTACAAGTGGATGAC
AGAAAACTGCTGGCTGTTATTGGCCCGGTGGGCAGCGGAAAGTCTTCACTTCTCAGTGCA
ATCTTAAGCGAACTTCCTGCCAAGCTGGGTTGCGTGAAAGTTCAAGGTCGAATTGCTTAT
GTTGGTCAAATTCCTTGGGTTTACTCCGGGTCAATCAAAGATAACATTCTGTTTGGTGAA
AAGTACGAACCAGAGCGTTTTCAGGCAGTTGTTGAGGCCTGCGCTTTGACAAAGGACATT
CAGTCGTTTCAAAGCGGCGAAGAAACGTTGGTGGGTGAACGTGGGGTTACACTGAGTGGG
GGTCAGAAAGCCAGGCTAAGTCTTGCAAGAACCGCGTACCGCGAAAATATTGACATTGTA
TTGTTGGATGATCCATTGAGTGCAGTTGATTCAAATGTGGCAAACCATATTTTCCATCAA
TGCATTGATGGATATTTGAAGAACAAGGGCTCCATTTCACATTCGGGAACTTACGAAGAG
CTTCTTGCCGATGGAACAGACTTCGCATGGTTGCTAAAGCGTGGCGACGACAAAACAACA
AAACCCGTCGGGGCCCAACGCCAAGTGTCGTTGAAAACCTCCGATCATCTATTGGTCGAA
CACAACAAGGAAAATGGCGCAAACAATCAGGCTGAATTTGTTGCTGATGTCAGGGAAGAA
GAACTAAAGGCACAAGGAAGTATTGGTTGGAGGTCTTACGCGGATTATCTAATAAACAAC
AAGTTTACATTTTTTCTTGTGGTCATACTTTTAATAATCAACCAAACTTTGTATGTTCTG
ATTGATTGGTGGATTTCCCAATGGTCGTCTGCCTTTGAAAGTGTCGAAATGAACTCCATG
CATTTAGGAGAAAACGTTACGAACCCGGATGTCACCACTTCAGCCAACGTCGCCATAATT
AATAATCAATTTTACATTCTGATCTTGACCTACATTCTTGTTGGCTTTATTGCCACTATA
TTTATGCGTTACACTCTCCAAATGCATCATTTGCTTGTGTCAGGAAAAGTTATGCACGAC
AAAATGCTGCAATCATTATTTGACGCTCCAATTCGTTTTTTTGATGTAAACCCTGTTGGT
GCTTGGTACGCATTTCTGACCGGATCAAGGTGGTTTGGGTTGCGATTGGATTTAATTGGG
GCTATGTTTATCGGGGCAGTGATGTTTTTGTCGCTGATTACTGTGACAGTAACAGATTTA
AACGCAGGGCAGATGACGTCAGTTGAGCGAATTCAGCAGTACCACAATCTTCCACGCGAG
GCGGCCCACTACATATCTCGAACCGACAAAGACCTTTCTAACGATTGGCCTTCACGTGGA
AAAATAGAGTTTTGTAACTTATCATTTGCACACTACAATGGAGGGCCTGATGTGTTGCAC
GAGATTTCGCTTGTAATCCTTCCGAGGGAAAAGGTTGGAATTGTAGGAAGAACCGGGGCA
GGAAAAAGTTCATTTATTTCGTGCTTGTTTCGTTTGAACGAGTTTACATCAGGAAAGCTG
ATGATTGACGACGTAGATGTTTCCAAAATAGGATTGACTGCTTTGCGTTCATCCATTTCC
GTTATACCTCAGGACCCAATTTTGTTCGCCGGGACCTTGCGTAACAATCTTGACCCATTC
AGTGCTTATTCCGACTTTGAACTCTGGACAGCATTGGAAAAGGTTTTGCAACAAGGCAGG
GTGGTCGAGTTTGACGCACCACATACACTATTGGGAAATTGTGACAGCGTGTTCAGTAAT
ATGGTGGAAGCATTTGGGGAATCTGAAAGCAAAATATTGCGCATTGGAGCTAAACAGGTG
CAAATGAAAGAAACCATCGAACAATTTCCTTCAAAACTTCAAATCGAGCTTGCTGAATCA
GGATCAAATTTCAGCGTCGGTCAACGACAACTTATTTGTCTCGCTAGAGCAATTCTCAGA
AAGAATACAGTTCTTTCAATCGACGAAGCCACAGCAAACGTCGACATCAGAACAGATCAA
CTCATTCAAAAGACAATCCGAAATACGTTCCATGATTGCACAGTCATTACTGTAGCTCAT
CGAATCAACACTATTATCGACTGTGATCGTGTCCTGGTTTTGCAACAAGGCAGGGTGGTC
GAGTTTGACGCACCACATACACTATTGGGAAATCGTGACAGCGTGTTCAGTAATATGGTG
GAAGCATTTGGGGAATCTGAAAGCAAAATATTGCGTATTGGAGCTAAACAGGTACAGCAG
GCCCAAACAGAGTAA
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[17-112] 12.245 |
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[18-110] 3.01E-7 - T[434-618] 1.73E-7 |
| Pfam |
ABC1_TM_dom (IPR011527) - T[21-112] 1.0E-7 - T[445-567] 2.0E-6 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[171-372] 1.81E-39 - T[634-916] 3.26E-51 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[174-427] 17.867 - T[642-921] 15.96 |
| Pfam |
ABC_transporter-like (IPR003439) - T[191-326] 3.1E-14 - T[659-852] 1.6E-25 |
| SMART |
AAA+_ATPase (IPR003593) - T[200-376] 2.8E-6 - T[668-898] 5.6E-6 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[298-312] . - T[824-838] . |
| Gene3D |
ABC1_TM_sf (IPR036640) - T[412-569] 6.0E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MRP1_HUMAN | 38.875 % | 261 | 3.28E-72 |
| MRP5_HUMAN | 35.861 % | 274 | 1.32E-76 |
| MRP4_HUMAN | 45.433 % | 332 | 8.89E-97 |