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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S5...'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'
  3. Transcript 'Phmamm.CG.MTP2014.S4...'
  4. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S250.g06137.01.t

Possible name(s)

CARF; SENP2; SENP3-EIF4A1

Location

S250 [72,524 / 76,040]

Sequences

Amino acid sequence

Length: 532

>Phmamm.CG.MTP2014.S250.g06137.01.p
MSLTIEVYDSGPEEETCSEKKVTPSANIVEIDELIKSKQTEGSKKLRELLNGNQSNLLKE
YGCWVTFPSSNAHSGHVVGEAVEVTQPVDPRLITKINSLVDEGVFSAQEIKERLSSYVNN
ELFRDTKPPPLSNKRFHPTLKVIRNHYFRAFIDKKLDGNETPLNMKVLMTLDPLVVEKIA
NQKIAMSAKAVRPDPRNQISGIISRIRNNIQGVTSEADLVKARDELTSILQDIHHASDYS
EDIDLVGSSLFEVSKSDPNLPVEATEEVTVLEPFYQVALDNSSFPATYAVEENVSGIGTT
ELQINLQPQFTPSIKQVTQNSLEQLLLKNGPHYLSLVQLKCLEPELDLEERQLVLLSDKN
FKEGWLVDDVLNSYLWSLCQEYKHVLYASSEHSSLLQQDMAVPELWQDETINGKKYIFVP
WNPTGAHWILLAVDVVKRTLMYLDPMQLSLDINDVLVKMAKDFMTKLMKDKFDIKIVALE
TKNRTLQEDVLGCGVLVCMYARWLASNQPLLNSGSDYAYRKEIFDCISGSLF

Nucleotide sequence

Length: 1,599

>Phmamm.CG.MTP2014.S250.g06137.01.t
ATGTCCCTTACAATAGAAGTATATGACAGTGGCCCTGAAGAGGAAACTTGTTCCGAGAAA
AAAGTAACTCCTTCAGCAAATATTGTGGAGATTGATGAGCTGATAAAATCCAAGCAGACT
GAGGGGAGTAAAAAGTTGAGGGAACTGCTCAATGGCAACCAATCAAACTTGTTGAAAGAA
TATGGTTGCTGGGTAACATTTCCATCAAGCAATGCCCACTCAGGACATGTGGTTGGAGAG
GCTGTTGAAGTAACTCAACCAGTGGACCCTCGTTTAATCACAAAAATCAACAGTTTAGTT
GATGAAGGGGTTTTCTCAGCCCAGGAAATTAAAGAACGATTATCTTCTTATGTCAACAAT
GAGCTTTTTCGTGACACCAAACCTCCACCCTTGTCAAACAAAAGGTTTCATCCCACACTG
AAAGTCATACGCAATCATTATTTCAGAGCGTTTATTGACAAGAAACTTGATGGGAATGAA
ACACCTTTAAACATGAAAGTTCTTATGACACTTGACCCATTGGTTGTTGAAAAGATTGCC
AATCAGAAGATAGCAATGAGCGCCAAGGCTGTAAGGCCTGACCCAAGAAATCAAATTTCA
GGCATTATAAGTCGGATTCGAAATAACATACAAGGTGTAACATCTGAAGCGGACCTGGTT
AAAGCCCGCGACGAACTGACAAGCATTCTTCAAGATATACACCATGCGTCTGACTACAGT
GAAGATATCGACCTTGTAGGCAGTAGCTTGTTTGAGGTTTCAAAGTCAGACCCTAACTTG
CCTGTTGAAGCGACTGAAGAGGTAACGGTGCTTGAACCGTTCTACCAAGTGGCTTTGGAC
AATTCAAGCTTTCCCGCAACCTACGCGGTAGAGGAGAACGTGTCAGGCATTGGAACAACA
GAGTTACAGATCAATCTCCAACCCCAGTTTACGCCGAGTATAAAACAAGTAACGCAGAAC
TCATTGGAACAACTTCTGCTCAAAAACGGCCCCCACTACCTCTCGTTGGTCCAATTAAAG
TGCCTTGAACCTGAACTTGATTTAGAAGAGCGACAGTTAGTCTTGCTCTCGGATAAGAAT
TTTAAGGAAGGGTGGCTAGTGGACGACGTTCTTAACAGCTACCTTTGGTCCTTATGTCAA
GAGTACAAACATGTATTATACGCCTCTTCGGAGCATTCGAGTTTGTTGCAACAGGATATG
GCCGTGCCTGAGCTATGGCAGGATGAAACCATTAATGGGAAAAAGTACATATTTGTCCCA
TGGAACCCAACAGGAGCTCACTGGATACTTCTAGCTGTTGACGTTGTCAAACGAACGCTG
ATGTATTTAGACCCAATGCAGTTGTCATTAGACATCAACGACGTACTTGTCAAAATGGCG
AAGGACTTCATGACAAAGTTAATGAAGGATAAGTTTGACATAAAAATCGTGGCGTTAGAA
ACCAAAAACCGAACACTGCAGGAAGATGTATTGGGTTGTGGAGTGCTTGTTTGCATGTAC
GCACGGTGGTTAGCATCTAATCAACCTCTTCTTAACTCCGGTTCAGACTATGCGTACAGA
AAAGAAATTTTCGACTGTATCTCTGGAAGTTTGTTTTAG

InterProScan

Pfam
CaRF (IPR029309) - T[29-147] 2.4E-22
ProSiteProfiles
Peptidase_C48_C (IPR003653) - T[346-504] 12.276
Pfam
Peptidase_C48_C (IPR003653) - T[404-509] 1.3E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value