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TRANSCRIPT CARD

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  1. Clone 'citb016e03' > 
  2. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S2542.g16800.01.t

Possible name(s)

CPXM1; EDIL3; RS1

Gene model

Phmamm.CG.MTP2014.S2542.g16800

Location

S2542 [1,579 / 3,026]

Sequences

Amino acid sequence

Length: 157

>Phmamm.CG.MTP2014.S2542.g16800.01.p
MGINGLRSGHIADDALSSSTFFDSAISDLHHTRYGRLYTPNRPGLHYGSWVALNRVAGEW
IQVDLLQPKRITGVITQGRNQLDQWVTRYKIQYTRPHETTWQTVKDASGHDDNFYGNSDS
DTEVTNMFHHPIVAIKLRLVAQEWHNYISLRHEYLTC

Nucleotide sequence

Length: 474

>Phmamm.CG.MTP2014.S2542.g16800.01.t
ATGGGGATAAATGGTCTGAGAAGTGGTCACATTGCCGACGATGCGCTCTCTTCATCAACG
TTTTTTGATTCCGCAATCAGCGACTTGCATCACACTAGATACGGCCGACTGTATACTCCC
AACAGACCCGGATTACACTACGGGTCATGGGTTGCTTTAAATAGGGTGGCAGGGGAATGG
ATTCAAGTCGATTTGCTTCAACCAAAAAGAATCACTGGAGTCATCACACAAGGAAGAAAC
CAGCTTGACCAATGGGTGACACGGTACAAAATTCAGTATACGAGGCCTCATGAGACTACG
TGGCAAACTGTTAAAGACGCTTCTGGTCATGATGATAATTTCTACGGGAACAGTGACTCG
GACACCGAAGTGACTAACATGTTTCATCACCCGATTGTTGCAATCAAGCTTCGTCTTGTG
GCTCAGGAATGGCACAACTATATTTCGCTTCGCCACGAGTACTTGACTTGTTAG

InterProScan

ProSiteProfiles
FA58C (IPR000421) - T[1-157] 29.228
SMART
FA58C (IPR000421) - T[2-157] 1.0E-9
Gene3D
Galactose-bd-like_sf (IPR008979) - T[3-157] 2.6E-41
SUPERFAMILY
Galactose-bd-like_sf (IPR008979) - T[4-157] 1.78E-34
CDD
FA58C (IPR000421) - T[5-153] 7.28304E-35
Pfam
FA58C (IPR000421) - T[48-153] 5.1E-25
ProSitePatterns
FA58C (IPR000421) - T[49-78] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EDIL3_HUMAN 33.544 % 87.8 5.92E-21
XLRS1_HUMAN 31.847 % 97.4 9.11E-26
CPXM1_HUMAN 41.88 % 87.8 7.35E-21