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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C2.236.v1....' > 
  2. Transcript 'Moocul.CG.ELv1_2.S75...' > 
  3. Transcript 'Moocci.CG.ELv1_2.S27...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S2548.g16806.01.t

Possible name(s)

NLRP13; RNH1

Gene model

Phmamm.CG.MTP2014.S2548.g16806

Location

S2548 [12,739 / 16,787]

Sequences

Amino acid sequence

Length: 668

>Phmamm.CG.MTP2014.S2548.g16806.01.p
MPRLEIAEIKNINTLNYSYETSFQQREKVLQRFCQSSGNISINEIWIKSQEYAESRKKAF
VQPVPIIPGKIINAPQINPNIIGVIGQAGIGKTTFTKMLVQQVLSKQILKSVSFLFYLFV
REIDFSRDCNVLQFLVRSGLPEWKFTKERDHALIQQINTDKNVLVVIDGFDEAVSSKSQY
AKISLYGKASPELILLNLMSGNILPLAKKVITSRPAELFRLDSQARPAFLIQVLGLSKES
QDLLGEQICGKEKYKKLKTMLYKNLDLSLYWYVPIYCIMAFSYFANTENMESVSLTLTSL
LTATLIDYARTDHMRGKEVELEKLTHLAWNGIWSKNCIFPISSLEEVGLDYTSVQAFLQM
ALSKEAQDDDMLAFVVNALLSKGNQTSITLQGSMLPSDAVSLCYLLKGFTDKGHRIKKID
VQTNPPCNFVQDSCNRFAKGIASGIKIIELVLSDVKFGDAGTKGVSGCIPQVEKLQIERC
NITEHGIPDIVEKLSELSGQITELKLGGNKLTDTGGELLAPGISHIKRLHLEDCGITHVC
VEKVVEGLQNNNAQLDHLSLAGNKIGNEGAAVLAEDLHRIKGLNLLLCHITEEGVVKLAA
KAKELEHQMSLLDLSENVIGEKGVNELSLCGGKIDKLKLQYCDLSENHQKNLKDHLGTSV
IFYEEVKR

Nucleotide sequence

Length: 2,007

>Phmamm.CG.MTP2014.S2548.g16806.01.t
ATGCCACGGCTTGAGATTGCAGAAATCAAAAACATTAATACCCTCAACTATAGTTATGAA
ACCAGCTTTCAGCAGCGTGAGAAAGTTTTACAAAGGTTTTGCCAGAGTTCAGGCAACATA
TCGATAAATGAGATTTGGATTAAATCGCAGGAATATGCAGAGTCACGTAAAAAAGCCTTT
GTTCAGCCTGTGCCTATTATTCCTGGAAAGATAATTAATGCCCCACAAATCAATCCCAAT
ATCATTGGAGTGATAGGTCAAGCAGGGATCGGCAAGACAACATTTACAAAAATGTTAGTC
CAACAAGTATTGTCCAAGCAAATTTTAAAATCTGTTTCTTTTCTTTTCTATCTCTTTGTG
AGGGAGATTGACTTCTCTAGAGATTGCAATGTTCTTCAGTTTCTTGTACGAAGTGGCTTG
CCAGAGTGGAAATTTACAAAAGAGCGTGATCATGCTTTGATACAACAAATAAACACAGAT
AAAAATGTTTTGGTTGTGATAGATGGCTTCGACGAGGCAGTAAGTTCAAAATCACAATAT
GCAAAAATTTCTCTCTATGGCAAGGCATCACCTGAGCTAATTCTTCTAAATTTAATGTCA
GGAAATATTTTGCCATTGGCCAAAAAGGTAATTACTTCTCGCCCCGCTGAATTGTTTAGG
CTTGACTCCCAGGCTCGACCAGCTTTTCTAATCCAAGTCCTTGGTTTAAGCAAAGAGTCT
CAGGATCTTCTTGGTGAACAGATTTGTGGTAAAGAAAAGTACAAAAAACTGAAAACGATG
TTGTATAAAAATCTTGATCTTTCTCTGTACTGGTATGTTCCAATCTACTGCATCATGGCA
TTCTCTTACTTTGCCAACACAGAAAACATGGAGTCAGTCTCCCTTACACTAACCTCTCTT
TTGACAGCAACTTTAATTGATTATGCACGAACTGATCACATGCGAGGTAAGGAAGTTGAG
CTTGAAAAGTTGACACATCTTGCTTGGAATGGCATTTGGAGTAAAAATTGCATTTTTCCT
ATTAGCTCTCTTGAGGAAGTTGGTCTAGACTATACATCAGTTCAGGCATTTCTTCAGATG
GCCCTGTCTAAAGAAGCCCAAGATGATGATATGCTTGCTTTTGTTGTTAATGCTTTGCTG
TCCAAAGGAAATCAAACTTCCATAACATTACAAGGGTCAATGCTTCCAAGTGATGCTGTT
AGTTTGTGCTATTTATTGAAAGGTTTTACTGACAAGGGACATAGAATCAAAAAGATCGAT
GTCCAAACCAACCCACCATGCAATTTTGTTCAAGATTCCTGTAACAGATTTGCTAAAGGA
ATTGCATCAGGCATTAAGATCATAGAACTTGTCCTATCCGATGTAAAGTTTGGAGATGCA
GGAACCAAAGGCGTTTCAGGTTGTATTCCTCAAGTTGAAAAACTCCAAATCGAGAGATGC
AACATCACAGAACATGGAATTCCAGACATTGTTGAGAAACTGTCTGAGCTAAGTGGACAG
ATAACTGAACTGAAACTTGGTGGAAACAAGCTGACTGATACTGGTGGAGAACTTCTTGCT
CCTGGAATCTCCCATATAAAGCGGCTGCATCTAGAAGATTGTGGCATTACCCATGTTTGT
GTGGAGAAAGTGGTCGAAGGATTGCAGAACAATAATGCACAACTTGACCATCTGAGCCTT
GCTGGAAACAAGATTGGCAATGAAGGTGCTGCCGTGCTGGCTGAAGACCTGCATAGAATA
AAGGGACTCAACTTGCTCCTATGCCACATTACCGAAGAAGGTGTGGTTAAACTTGCAGCA
AAAGCAAAAGAGCTTGAGCATCAGATGAGCTTGCTGGATTTGTCAGAAAATGTGATAGGA
GAAAAAGGAGTGAACGAATTGTCTCTTTGTGGAGGAAAAATAGACAAACTTAAACTACAA
TATTGCGATTTGTCAGAAAATCATCAGAAAAACCTGAAAGATCACTTGGGCACAAGCGTG
ATTTTTTACGAAGAAGTTAAGCGATGA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[75-292] 8.88E-9
ProSiteProfiles
NACHT_NTPase (IPR007111) - T[80-215] 17.083
Pfam
NACHT_NTPase (IPR007111) - T[83-242] 1.5E-19
Gene3D
LRR_dom_sf (IPR032675) - T[342-659] 4.8E-38
Pfam
Leu-rich_rpt (IPR001611) - T[501-520] 0.07 - T[552-574] 0.019

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value