- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S258.g06248.01.t
Possible name(s)
SMAD1; SMAD2; SMAD3
Gene model
Location
S258 [47,203 / 51,549]
Amino acid sequence
Length: 430
>Phmamm.CG.MTP2014.S258.g06248.01.p
MSMLQFTPPIVKELLGWKRGEMSAQDEKFAEKAIKSLVKKLKKSGGLEDLKKAVTKQSID
TKCVKIPRSLDGRLQVSHKKSLPHVLYCRLWRWPDLRNHHELRPVEKCEYAFQLKRDEVC
VNPYHYTRVETPALPPILVPRQSEPMPAELPLLDDWSIVPENATFEPSMQPSGNFTIPES
PPPGYMSEDSEFSESGSTMSSPGPSGTFSDTPGGQTGSTGSGSEDVQSVAYHEPPFWCSI
SYYELNQRIGETFNASQSSLTVDGFTDPSNAERFCLGLLSNVNRTQHVEITRRHVGKGVR
LYYIAGEVFAECLSDSAIFVQSPNCNRRYGWHPATVVKIPPGCHLKIFNNQEFAALLSQS
VNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQHVTSTPCWIEMHLNGPLQWLDKVLQQMG
APHIPCSSMS
Nucleotide sequence
Length: 1,293
>Phmamm.CG.MTP2014.S258.g06248.01.t
ATGAGTATGCTGCAATTCACACCACCCATAGTAAAGGAGTTACTGGGATGGAAAAGAGGA
GAAATGTCTGCTCAGGATGAAAAGTTTGCTGAGAAGGCAATTAAGAGTTTGGTAAAAAAA
TTAAAGAAAAGTGGTGGGCTTGAAGATTTAAAGAAAGCTGTCACAAAACAGTCAATTGAC
ACTAAATGTGTCAAGATACCTCGCTCTTTGGATGGAAGGTTACAGGTTTCCCATAAAAAA
TCACTACCCCATGTGTTATACTGCCGTTTGTGGAGATGGCCTGATCTTCGAAATCATCAT
GAGCTTCGACCTGTAGAAAAGTGTGAATATGCTTTTCAGTTGAAAAGAGATGAGGTATGT
GTTAATCCCTATCATTACACACGAGTGGAGACACCAGCTCTCCCTCCCATTCTTGTACCT
CGCCAAAGTGAACCCATGCCAGCAGAACTTCCTCTATTGGACGACTGGAGCATTGTCCCA
GAAAATGCAACTTTTGAGCCAAGCATGCAGCCATCAGGGAACTTTACAATACCAGAAAGT
CCACCACCAGGCTACATGAGTGAGGATAGTGAATTTAGTGAATCTGGTTCAACAATGTCG
AGTCCAGGACCATCAGGAACTTTTTCAGATACACCAGGAGGTCAAACTGGATCAACAGGA
TCTGGATCTGAAGATGTACAGTCAGTTGCTTATCATGAACCTCCATTTTGGTGCTCAATC
TCTTATTATGAGCTTAATCAAAGAATAGGTGAAACATTTAATGCCTCTCAATCATCTTTG
ACTGTTGATGGATTTACTGACCCTTCAAATGCAGAGAGATTTTGTCTTGGACTACTTTCA
AATGTCAATCGCACTCAACATGTTGAGATAACCAGGAGACATGTAGGCAAAGGTGTTCGT
CTTTACTACATTGCTGGTGAAGTGTTTGCTGAATGTCTTAGTGACAGTGCCATATTTGTT
CAAAGTCCTAATTGCAATAGGCGATATGGTTGGCATCCAGCCACTGTAGTAAAAATACCT
CCAGGCTGCCACTTGAAAATTTTCAACAATCAGGAATTTGCTGCTCTACTTTCGCAATCT
GTTAACCAAGGATTTGAAGCTGTTTATCAATTAACAAGAATGTGCACAATCCGCATGAGT
TTTGTCAAAGGCTGGGGTGCTGAATACAGAAGGCAACATGTTACCTCTACTCCTTGTTGG
ATAGAAATGCACCTTAATGGCCCACTGCAATGGCTTGACAAAGTGCTTCAGCAAATGGGT
GCACCACATATCCCATGTTCCAGCATGTCTTAA
| Gene3D |
SMAD_MH1_sf (IPR036578) - T[1-143] 8.6E-64 |
| PANTHER |
Dwarfin (IPR013790) - T[1-430] 1.3E-228 |
| ProSiteProfiles |
MAD_homology_MH1 (IPR013019) - T[9-135] 35.427 |
| SUPERFAMILY |
SMAD_MH1_sf (IPR036578) - T[9-130] 1.44E-46 |
| SMART |
MAD_homology1_Dwarfin-type (IPR003619) - T[25-133] 6.3E-55 |
| Pfam |
MAD_homology1_Dwarfin-type (IPR003619) - T[31-130] 5.5E-40 |
| SUPERFAMILY |
SMAD_FHA_dom_sf (IPR008984) - T[179-420] 6.21E-92 |
| Gene3D |
SMAD-like_dom_sf (IPR017855) - T[228-430] 5.2E-96 |
| SMART |
SMAD_dom_Dwarfin-type (IPR001132) - T[235-406] 7.2E-101 |
| Pfam |
SMAD_dom_Dwarfin-type (IPR001132) - T[236-406] 3.4E-77 |
| ProSiteProfiles |
SMAD_dom_Dwarfin-type (IPR001132) - T[237-430] 73.848 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMAD3_HUMAN | 72.791 % | 635 | 0 |
| SMAD2_HUMAN | 66.454 % | 607 | 0 |
| SMAD1_HUMAN | 58.405 % | 510 | 4.26E-180 |