- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S262.g06313.01.t
Possible name(s)
GTF2A1; TAF9
Gene model
Location
S262 [124,903 / 127,505]
Amino acid sequence
Length: 462
>Phmamm.CG.MTP2014.S262.g06313.01.p
MAKSSNPNQVSKLYQTVIDDVINNIRESFLDDGVDEQVLQELKQTWEAKVVQSKAVQNPT
DDIRHAPGAQMPMYVYANTSGGNDALPHQVVYRTIPGGQALQMTGAGQQAAMALPSSVVY
QQQRTSATANQAQIYASYQPSTHQNTSQAKVVLATQKPVSSSADAGKQTQSSAVIQLDGA
SDCQPSTSTHCMPSREKISNRITDKKCKAKTLKFIAQVDGNVGSSSEDDDDDDDDDDEDD
DEEDDEDKADKEDVVDEEPLCSDDDGSDEDPVELFDTDNVVVCQYDKIHRTKSRWKFNLK
VGIMNLNGKDFVFQKANGEADCNTSDETTMLANMPKDAHTIVAMLKDMGVTDYEPKVIHQ
MLELTYRYVSEVLDDAKTFANHAGRSTVTLDDTKLAIKSQLDHSFTNPPPRETQKRAAGI
NSRSVNSPANVSSKPQFVNPQMIMPTGNSAKRKWHEEDDYDD
Nucleotide sequence
Length: 1,389
>Phmamm.CG.MTP2014.S262.g06313.01.t
ATGGCCAAGTCGTCAAATCCCAATCAGGTTTCCAAACTGTATCAAACTGTTATAGATGAT
GTTATAAACAACATTAGGGAGTCTTTCTTAGATGATGGTGTAGATGAGCAAGTGTTACAG
GAACTGAAGCAAACATGGGAAGCAAAAGTTGTCCAGTCCAAAGCAGTTCAAAATCCAACT
GACGATATCAGGCATGCTCCTGGCGCACAAATGCCGATGTATGTGTATGCCAACACTTCA
GGGGGCAATGATGCCTTGCCCCACCAAGTCGTTTATCGGACAATTCCTGGTGGACAAGCC
TTACAGATGACCGGTGCTGGACAACAAGCAGCAATGGCTTTACCAAGCAGTGTTGTTTAT
CAACAACAACGTACTTCTGCAACTGCAAATCAAGCTCAAATATATGCATCCTACCAGCCA
TCCACTCACCAAAACACATCACAGGCTAAGGTTGTATTGGCCACTCAGAAGCCAGTTTCC
TCATCAGCTGATGCTGGTAAACAAACACAATCTTCTGCAGTAATTCAGCTAGATGGAGCG
TCAGACTGCCAACCATCCACCAGTACACACTGTATGCCTTCCAGGGAAAAAATCTCAAAT
AGAATAACTGATAAAAAATGCAAAGCTAAAACACTGAAGTTTATTGCACAAGTAGATGGT
AATGTTGGATCCTCTTCTGAGGATGATGATGATGATGATGACGACGATGATGAAGATGAT
GACGAAGAAGATGATGAAGACAAAGCTGATAAGGAAGATGTTGTAGATGAAGAACCATTG
TGTTCAGATGATGATGGTTCTGATGAGGACCCTGTTGAATTGTTTGATACTGACAATGTA
GTTGTGTGCCAATATGACAAAATTCACCGCACCAAATCTAGATGGAAGTTTAACTTAAAA
GTAGGAATAATGAATTTAAATGGGAAAGACTTTGTTTTTCAGAAGGCAAATGGGGAGGCT
GATTGCAATACATCGGATGAGACAACAATGTTGGCTAACATGCCAAAAGATGCGCACACA
ATTGTGGCAATGTTAAAGGATATGGGAGTAACAGATTATGAACCTAAAGTAATACATCAG
ATGCTGGAGTTAACTTACAGGTATGTTTCAGAAGTTCTGGATGATGCAAAAACTTTTGCA
AATCATGCTGGACGATCTACAGTGACATTAGATGACACAAAACTTGCCATAAAGTCACAG
CTTGATCATTCTTTTACAAATCCACCTCCTAGAGAAACTCAAAAAAGAGCTGCTGGCATC
AACAGTCGTTCTGTTAATTCCCCAGCAAATGTTTCATCAAAACCTCAGTTTGTAAATCCT
CAGATGATTATGCCAACAGGAAACTCAGCTAAACGAAAGTGGCATGAAGAAGATGATTAT
GATGATTAA
| PANTHER |
TFIIA_asu/bsu (IPR004855) - T[8-69] 3.5E-69 - T[75-321] 3.5E-69 |
| SMART |
TFIIA_asu/bsu (IPR004855) - T[12-322] 3.2E-85 |
| Pfam |
TFIIA_asu/bsu (IPR004855) - T[13-67] 1.8E-21 - T[107-320] 5.7E-47 |
| SUPERFAMILY |
TFIIA_b-brl (IPR009088) - T[267-321] 7.85E-19 |
| Gene3D |
TFIIA_b-brl (IPR009088) - T[276-321] 1.9E-24 |
| Pfam |
TFIID-31 (IPR003162) - T[333-423] 4.2E-29 |
| CDD |
TFIID-31 (IPR003162) - T[335-422] 4.51086E-42 |
| Gene3D |
Histone-fold (IPR009072) - T[335-402] 3.9E-27 |
| SUPERFAMILY |
Histone-fold (IPR009072) - T[336-400] 2.39E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TAF9_HUMAN | 53.409 % | 109 | 3.56E-27 |
| TF2AA_HUMAN | 70.149 % | 108 | 5.38E-26 |
| TF2AY_HUMAN | 40.94 % | 107 | 3.86E-25 |