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  1. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S2631.g16898.01.t

Possible name(s)

NLRP10; NLRP12; NLRP3

Gene model

Phmamm.CG.MTP2014.S2631.g16898

Location

S2631 [1,637 / 7,678]

Sequences

Amino acid sequence

Length: 956

>Phmamm.CG.MTP2014.S2631.g16898.01.p
MAKSDKLDVSTFWIELSGTAAENASYALEPSATSSKHMDLGTAAKILEQIYISLWSRESF
VHSFEKNEKLKIKVITKNKQASLTLFNQSNTDQLRQQLNNSISAVTHITGIDCGTIECTT
VAEMKKKSVSNQEYDDMMTQSQLNIMRLAKQNASTITYPWAHASVSAPNANLLDETQPKE
IQECKAPRDENKQKETESKQQVSQETSILHLAPSEKTNIYTGTVNQFQTSVNQEPVLDVE
ALAQELRQQLWSQAEARSSYLECPVEIKRTYKMARLEMAENAQMHMIGYNYETSIQNRKQ
LLERFSECAGNISINEIFIKSKEYAKSKQPKYRSQQIIQPNVYSLGKTLSTAPQYYPPQP
NSNIIGVIGQAGIGKTTFTKMLIQQALSGQLPETVSFLFYIFVREIDFSRDCNVLQFLVR
SALPEWKFTENRDHALIEKIKLNENVLVVIDGFDEAVISNVPFTNISIYDETSPKLILLH
LIVGDILPLAKTVITSRPAEMFNLNHYIRPAFLLKILGLSKESQDILGQQICGEKYKDLK
MKLYKNPDLSLYWYVPIYCIMAFSYFANEERGISESFTFTSLLTMTLIDYVSTDHVRQKD
VELEKFANLAWNGVLDKTCIFQIRHLKQVGLDYSTVQAFLQIALSKGLRLNMSILQGDQM
IFFSHLLWQEYFASVYLFLIMPVDEFQQHLQKNLFVLSKVVLKFIFGLCNREVFSQLLSV
ISVSTDTWVAKKRCLYAHVKKLGSKTDCSFQKLLEYGSLLLEAQDENMLQAFITGFDFKY
VLTPITLEGSLLPSDVASFCYLLRGFQNQNMRFREINIATQGQHILCTFIDDSFTRLALE
IGSGLKMTELKLGQNKLTDFGAELLAPCIPYVQELHLDNCDITEVGVQTITQNVVLLNGS
IELLNLSGNKVGNKGAAALAKGLHKIKQLILLMCHITEEGSTTIATKAKNLTSQVR

Nucleotide sequence

Length: 2,871

>Phmamm.CG.MTP2014.S2631.g16898.01.t
ATGGCAAAATCAGATAAGCTTGATGTTTCCACATTCTGGATTGAGTTGTCTGGCACTGCA
GCTGAAAATGCTTCCTATGCTCTTGAGCCGTCAGCAACATCTTCCAAACATATGGATCTT
GGAACAGCTGCAAAAATTCTAGAGCAAATCTACATCTCACTGTGGTCGAGAGAGTCGTTT
GTGCACAGTTTCGAAAAAAATGAAAAATTGAAAATTAAAGTGATAACAAAAAATAAGCAA
GCTTCACTTACTTTGTTTAATCAAAGTAATACAGATCAACTGCGACAGCAATTAAATAAT
AGTATCTCAGCTGTTACTCATATCACTGGGATTGATTGTGGCACGATTGAATGCACAACT
GTTGCTGAGATGAAAAAAAAATCTGTTAGCAATCAGGAGTATGATGATATGATGACACAA
TCTCAACTCAATATCATGCGGCTTGCTAAACAAAATGCTTCTACGATCACATACCCTTGG
GCTCATGCATCAGTTTCAGCACCGAATGCAAATCTGCTCGATGAAACACAGCCTAAAGAG
ATCCAAGAATGTAAAGCTCCACGTGATGAAAATAAACAGAAGGAAACAGAATCTAAGCAA
CAAGTATCTCAGGAAACTAGCATATTACACTTGGCACCCTCTGAAAAGACAAACATCTAC
ACAGGAACTGTCAATCAGTTCCAAACATCAGTTAATCAAGAACCTGTTCTGGATGTTGAA
GCCTTAGCACAGGAATTAAGACAGCAACTTTGGTCCCAAGCAGAAGCCCGTTCAAGCTAC
TTGGAATGTCCTGTAGAAATTAAAAGGACCTATAAAATGGCACGGCTGGAGATGGCAGAA
AATGCCCAAATGCATATGATTGGCTATAACTATGAAACAAGTATTCAAAACCGCAAGCAG
CTCTTAGAGAGGTTTAGTGAGTGTGCAGGCAACATATCCATAAATGAAATTTTTATTAAG
TCAAAGGAATATGCAAAATCAAAACAACCCAAATATCGTTCTCAACAAATCATTCAACCT
AATGTTTACTCATTGGGCAAAACCCTGAGTACTGCCCCACAGTACTACCCCCCACAACCC
AATTCAAATATTATTGGTGTGATAGGTCAAGCAGGCATTGGTAAGACAACATTTACTAAA
ATGTTGATCCAACAAGCATTGTCTGGTCAACTTCCTGAAACCGTTTCTTTTCTCTTCTAC
ATCTTTGTGAGGGAGATTGATTTCTCTAGAGACTGCAATGTTCTTCAGTTTCTTGTACGA
AGTGCCTTGCCAGAATGGAAATTTACAGAAAATCGTGATCATGCTTTGATAGAAAAAATA
AAATTAAATGAAAATGTTTTGGTTGTGATCGACGGATTTGATGAGGCAGTAATTTCCAAT
GTCCCATTTACAAATATATCTATCTACGATGAGACATCTCCTAAGCTAATTCTTCTCCAT
TTAATTGTAGGGGATATTTTGCCTTTGGCGAAAACGGTGATTACTTCTCGTCCTGCAGAA
ATGTTTAATCTTAACCACTATATTCGACCAGCCTTTCTATTAAAAATTCTTGGCTTAAGT
AAAGAGTCTCAGGATATTCTTGGTCAACAGATTTGTGGTGAAAAGTACAAAGATCTGAAA
ATGAAGTTGTACAAAAATCCTGATCTTTCTCTGTATTGGTATGTTCCTATTTACTGCATC
ATGGCTTTCTCTTATTTTGCTAACGAAGAAAGAGGAATTTCAGAATCTTTTACTTTCACA
TCCCTTTTGACCATGACCTTAATTGATTATGTGAGCACTGACCATGTGCGACAAAAAGAT
GTGGAACTGGAAAAATTTGCCAATCTTGCTTGGAATGGTGTATTGGACAAAACGTGTATT
TTCCAAATACGTCACCTCAAGCAGGTTGGTCTAGACTACAGCACAGTTCAGGCATTCCTT
CAGATTGCTTTGTCCAAAGGTTTGAGACTTAACATGAGTATTCTCCAAGGTGACCAGATG
ATCTTTTTTTCCCACCTTTTATGGCAAGAGTATTTTGCTTCTGTCTACCTTTTTTTGATT
ATGCCCGTTGATGAGTTTCAACAGCATTTGCAAAAAAACCTCTTTGTACTCTCTAAAGTT
GTGCTAAAGTTCATTTTTGGTCTTTGTAATCGTGAGGTCTTCTCCCAACTGCTATCAGTT
ATCTCAGTTTCGACAGACACATGGGTGGCTAAAAAAAGATGTCTTTATGCACATGTGAAA
AAGTTAGGTTCCAAAACAGATTGTAGTTTTCAGAAATTGCTTGAATATGGATCTCTTTTG
CTGGAAGCTCAAGATGAAAATATGCTCCAGGCTTTTATTACTGGATTTGATTTTAAATAT
GTCTTAACTCCAATAACTTTAGAGGGGTCCCTGCTTCCCAGTGATGTTGCTAGTTTTTGC
TATCTTTTGAGAGGTTTTCAAAACCAAAACATGAGGTTTAGGGAAATAAACATAGCAACA
CAAGGGCAACATATTCTGTGTACCTTTATTGACGATTCCTTTACCAGGCTGGCACTAGAA
ATTGGATCTGGATTGAAGATGACAGAACTTAAGTTGGGCCAAAACAAGCTAACAGATTTT
GGAGCAGAACTTCTTGCTCCCTGCATCCCCTACGTTCAAGAGCTACACTTGGACAATTGT
GACATCACAGAAGTCGGTGTGCAAACAATAACCCAAAATGTGGTGCTATTAAATGGCTCG
ATTGAACTTCTAAATCTTTCTGGAAACAAAGTGGGCAACAAAGGAGCTGCTGCACTTGCT
AAAGGTTTGCACAAAATAAAGCAACTTATCTTGCTTATGTGCCACATTACTGAGGAGGGC
TCAACCACAATTGCAACAAAAGCAAAGAATCTAACAAGTCAAGTAAGATAG

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[360-515] 3.81E-7
ProSiteProfiles
NACHT_NTPase (IPR007111) - T[363-498] 16.657
Pfam
NACHT_NTPase (IPR007111) - T[366-525] 8.1E-19
Gene3D
LRR_dom_sf (IPR032675) - T[779-954] 7.6E-18
Pfam
Leu-rich_rpt (IPR001611) - T[903-920] 0.045

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NLRP3_HUMAN 23.306 % 88.6 1.01E-17
NAL12_HUMAN 25.455 % 105 5.81E-23
NAL10_HUMAN 24.155 % 86.7 2.44E-17