Aniseed - Transcript Card

Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S264.g06341.01.t

Possible name(s)

CTRB1; CTRB2; CTRL

Gene model

Phmamm.CG.MTP2014.S264.g06341

Location

S264 [58,389 / 60,564]

Sequences

Amino acid sequence

Length: 241

>Phmamm.CG.MTP2014.S264.g06341.01.p
MIAAFAILLFVAGASADNRIVNGEEVTSTSVAPWQASLQQGGSHFCGGSLIDATHVMSAC
HCQKSFVNVVLGTLQYQNPKYEILSNDFLCHPSYNSRTIDYDYGIITLPEAVPSNDADAS
PITVANKEYPEGTNAQITGWGRLYGNGPIPDTLQVANVNLIDRSTCQETWTIVTERMQCA
GGQGEGACNGDSGGPLAVKDNGVWVLVGNTSWGASGCSTGVPSAWSKNFAVYSWIQANSN
I

Nucleotide sequence

Length: 726

>Phmamm.CG.MTP2014.S264.g06341.01.t
ATGATTGCAGCTTTTGCGATTCTTCTCTTTGTGGCCGGTGCCAGCGCTGACAATCGTATT
GTCAATGGCGAGGAAGTTACTTCAACTTCGGTAGCACCCTGGCAGGCATCTCTCCAACAG
GGAGGCAGTCACTTTTGCGGCGGATCCTTGATTGATGCTACCCACGTTATGTCCGCTTGC
CATTGCCAAAAATCCTTTGTAAATGTTGTATTGGGAACCCTTCAGTACCAAAACCCGAAA
TACGAAATTCTTTCCAATGACTTCCTGTGCCACCCAAGTTACAACAGCCGCACCATTGAT
TACGATTACGGCATCATCACTTTGCCCGAAGCTGTACCATCGAATGATGCTGATGCATCA
CCTATTACAGTAGCCAACAAAGAGTACCCTGAAGGCACAAACGCTCAGATCACAGGTTGG
GGCAGACTTTACGGCAACGGACCAATCCCCGATACCCTCCAGGTCGCCAATGTTAATTTG
ATCGACAGGTCCACATGCCAAGAGACCTGGACCATCGTCACTGAACGTATGCAGTGCGCT
GGCGGACAAGGAGAGGGAGCTTGTAATGGAGACTCTGGCGGTCCATTGGCCGTGAAAGAC
AACGGCGTCTGGGTGTTGGTCGGTAACACGTCGTGGGGCGCATCAGGATGCTCAACTGGT
GTTCCATCGGCTTGGTCAAAGAATTTTGCCGTCTACTCTTGGATTCAGGCAAATTCCAAC
ATTTAA

InterProScan

SUPERFAMILY	Peptidase_S1_PA (IPR009003) - T[8-239] 3.35E-61
SMART	Trypsin_dom (IPR001254) - T[19-235] 1.5E-57
Pfam	Trypsin_dom (IPR001254) - T[20-235] 5.1E-47
ProSiteProfiles	Trypsin_dom (IPR001254) - T[20-240] 27.597
CDD	Trypsin_dom (IPR001254) - T[20-238] 1.789E-66
PRINTS	Peptidase_S1A (IPR001314) - T[47-62] 2.8E-9 - T[98-112] 2.8E-9 - T[185-197] 2.8E-9
ProSitePatterns	TRYPSIN_SER (IPR033116) - T[186-197] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CTRL_HUMAN	38.362 %	132	8.05E-38
CTRB2_HUMAN	36.123 %	132	7.21E-38
CTRB1_HUMAN	36.123 %	132	1.34E-37