Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S267.g06400.01.t

Possible name(s)

IMPACT; RNF14

Gene model

Phmamm.CG.MTP2014.S267.g06400

Location

S267 [134,032 / 134,851]

Sequences

Amino acid sequence

Length: 272

>Phmamm.CG.MTP2014.S267.g06400.01.p
MDDLSRQVEEIEAISSIYENEWSVVDEFNRSYELRIGNKTPFALKFEVTLPTDYPSIHLP
SFTISAPWLKPPDRKAVEAKIETIGKDNGGENVLFLWIECLREFVDDKVRDFEWLKANGK
IDVKEKKVELSTAYEGPTIYHGDPITDRKSTFQGHVVKVTEALQVKTVLNELLTNRKIAN
ATHNILAYRIYNEKTKTYLQDYNDDGETAAGGRMLHLLQILDVKNVLVVVSRWYGGIQLG
PDRFKHINNSARSVLLEHGFIQNNDKKSKSHK

Nucleotide sequence

Length: 819

>Phmamm.CG.MTP2014.S267.g06400.01.t
ATGGATGATTTAAGTCGTCAAGTCGAGGAAATTGAGGCGATTTCTTCAATATACGAGAAC
GAGTGGTCTGTTGTTGACGAATTTAACAGGAGTTATGAGCTGAGAATTGGAAACAAAACC
CCATTTGCACTGAAGTTTGAAGTAACTTTGCCTACCGATTATCCTTCAATCCACTTGCCA
TCATTTACAATCTCCGCGCCTTGGTTGAAACCGCCCGACCGCAAAGCTGTTGAAGCCAAA
ATCGAAACGATTGGAAAGGACAACGGCGGCGAAAACGTGCTTTTCCTATGGATAGAATGC
TTAAGGGAATTTGTTGACGACAAAGTTAGGGATTTTGAATGGTTGAAGGCAAACGGAAAA
ATTGATGTCAAAGAGAAAAAAGTAGAGTTAAGTACTGCATATGAAGGTCCGACAATATAC
CATGGAGACCCAATTACTGACAGAAAAAGTACATTTCAAGGCCATGTAGTTAAAGTTACG
GAGGCATTACAAGTAAAAACTGTTTTAAATGAACTTCTTACAAACCGTAAAATAGCCAAT
GCCACCCATAACATATTGGCATACAGGATTTACAATGAAAAAACGAAAACTTATTTGCAA
GATTATAATGATGATGGAGAAACTGCTGCTGGTGGCCGCATGCTACATTTACTGCAAATT
TTGGATGTAAAAAATGTTTTAGTTGTGGTATCACGTTGGTATGGTGGAATTCAATTAGGA
CCAGATCGATTTAAACACATAAATAATTCTGCCCGTAGTGTTTTGTTGGAACATGGATTT
ATTCAAAACAATGATAAAAAATCAAAATCACACAAGTAA

InterProScan

Gene3D	UBQ-conjugating_enzyme/RWD (IPR016135) - T[1-112] 2.5E-18
SUPERFAMILY	UBQ-conjugating_enzyme/RWD (IPR016135) - T[5-107] 2.88E-16
Pfam	RWD-domain (IPR006575) - T[6-104] 8.2E-15
PANTHER	Impact (IPR023582) - T[7-269] 1.2E-82
SMART	RWD-domain (IPR006575) - T[9-108] 1.1E-15
ProSiteProfiles	RWD-domain (IPR006575) - T[9-108] 19.949
SUPERFAMILY	Ribosomal_S5_D2-typ_fold (IPR020568) - T[135-261] 2.69E-34
Gene3D	Impact_N_sf (IPR036956) - T[141-262] 6.7E-25
Pfam	Impact_N (IPR001498) - T[148-255] 5.9E-35
ProSitePatterns	UPF0029_Impact_CS (IPR020569) - T[211-240] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
IMPCT_HUMAN	43.878 %	243	1.47E-79