- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S269.g06427.01.t
Possible name(s)
ACTB; ACTC1; ACTG1
Gene model
Location
S269 [53,033 / 55,291]
Amino acid sequence
Length: 375
>Phmamm.CG.MTP2014.S269.g06427.01.p
MDDEVAALVIDNGSGMCKAGFAGDDAPRAVFPSLVGRPKHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRQDL
AGRDLTDHLMKILTERGYTFTTTAEREIVRDIKEKLCYVALDYDQELATAATSSSLEKSY
ELPDGQVITIGNERFRCPEAMFQPAMLGMESSGIHETTYNSIMKCDVDIRKDLYANTVLS
GGSTMFPGIGDRMQKEIASLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
Nucleotide sequence
Length: 1,128
>Phmamm.CG.MTP2014.S269.g06427.01.t
ATGGACGATGAAGTAGCAGCTCTGGTGATTGACAACGGTTCAGGAATGTGTAAAGCTGGA
TTTGCTGGAGATGACGCACCTAGAGCTGTGTTTCCGTCACTTGTTGGAAGACCCAAACAC
CAGGGTGTGATGGTTGGTATGGGCCAGAAGGACAGTTACGTTGGAGATGAAGCTCAAAGC
AAGCGTGGTATCCTCACATTGAAATACCCAATTGAACACGGAATTGTAACCAACTGGGAC
GACATGGAAAAGATCTGGCATCACACATTCTACAATGAACTTCGTGTTGCCCCCGAAGAG
CACCCTGTTTTGCTTACCGAAGCCCCACTTAATCCGAAAGCCAACCGTGAAAAAATGACT
CAAATTATGTTCGAGACATTTAACACACCTGCAATGTACGTTGCCATTCAAGCTGTTCTC
TCTCTTTATGCCTCAGGACGAACCACAGGCATCGTTTTGGACAGTGGTGATGGAGTCTCC
CACACCGTTCCTATCTATGAGGGATATGCCCTTCCACACGCTATCTTGAGGCAGGATTTA
GCGGGTCGTGATCTTACAGATCATCTAATGAAAATTCTAACCGAACGCGGATACACATTT
ACAACAACTGCTGAGCGAGAAATAGTCCGAGACATAAAAGAGAAATTGTGCTACGTTGCT
CTGGATTATGACCAAGAGTTGGCGACTGCAGCTACAAGCAGTTCGCTGGAAAAAAGCTAT
GAGCTTCCAGATGGACAAGTGATTACGATTGGAAACGAGAGATTCCGATGCCCAGAAGCA
ATGTTCCAACCAGCCATGCTTGGTATGGAGTCATCCGGCATTCACGAAACCACGTACAAC
TCTATCATGAAATGCGATGTTGACATTAGAAAAGATTTGTACGCCAACACCGTCCTTTCC
GGCGGAAGCACCATGTTTCCAGGTATCGGTGATCGTATGCAAAAGGAAATTGCGTCTCTA
GCGCCGTCCACTATGAAGATCAAGATTATTGCTCCTCCTGAACGCAAATACTCCGTATGG
ATCGGAGGATCTATTCTCGCATCCCTCTCCACTTTCCAACAGATGTGGATCTCAAAACAA
GAGTACGACGAATCTGGACCAAGCATTGTGCATCGCAAGTGCTTCTAA
| PANTHER |
Actin (IPR004000) - T[1-374] 1.2E-266 |
| Pfam |
Actin (IPR004000) - T[3-375] 1.8E-149 |
| SMART |
Actin (IPR004000) - T[5-375] 5.5E-239 |
| PRINTS |
Actin (IPR004000) - T[26-35] 1.0E-57 - T[49-60] 1.0E-57 - T[61-83] 1.0E-57 - T[115-128] 1.0E-57 - T[140-159] 1.0E-57 - T[236-252] 1.0E-57 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[53-63] . - T[356-364] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[104-116] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 93.6 % | 750 | 0 |
| ACTB_HUMAN | 93.6 % | 751 | 0 |
| ACTC_HUMAN | 90.107 % | 725 | 0 |