- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C5.66.v1.A...' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S26.g01043.01.t
Possible name(s)
FUCA1; FUCA2
Gene model
Location
S26 [80,783 / 83,399]
Amino acid sequence
Length: 455
>Phmamm.CG.MTP2014.S26.g01043.01.p
MRLIAVLVILAVCATRGYGEYKPNWESLDTRPLPSWYDEAKLGIFIHWGVFSVPSFGDGF
LAELFWYYWKALANPHAIDFMEKNYPPGFTYPDFAPQFTAEFFDPNKWADMFEASGAKYV
VFTSKHGEGYTNWPSATSVNWNSMDVGPKRDIVGDLANAIKNRTSLRFGLYHNLHDFLNP
LYLNDKQNNFTTNEFPRMKSMPELYDIVSRYKPDIVWSDGDQGTNSSYWNSAEFVAWLYN
ESPVKDIVVTNDRWGRDVLCKHGGFLTCDDRYNPHTLQTRKWENALTIDKHSWGYRRNAN
FNDFMSINELLQQLVTTISCNGNMLMNVGPTKEGTITPIFEERLRQMGEWLNVNGEAVYS
SKPWKHQNDQTNKDVWYTMNGKHVYAFSFSWPDSNILELGSPISTSSASVDLVGGASLLT
WQSISPGGVKITLPVLNPALTKAKWVYVFRLIGFV
Nucleotide sequence
Length: 1,368
>Phmamm.CG.MTP2014.S26.g01043.01.t
ATGAGGTTGATTGCTGTTTTGGTAATTTTGGCTGTTTGTGCAACAAGGGGATATGGAGAA
TACAAACCGAACTGGGAATCACTGGACACACGACCCCTGCCTTCATGGTACGATGAAGCA
AAACTTGGTATTTTTATTCACTGGGGAGTTTTTTCAGTACCAAGTTTTGGAGATGGATTT
TTGGCTGAACTATTCTGGTACTACTGGAAGGCATTGGCAAATCCACATGCTATAGATTTC
ATGGAAAAGAATTACCCTCCAGGTTTCACATACCCTGACTTTGCTCCCCAGTTTACAGCT
GAGTTTTTTGATCCTAACAAATGGGCTGACATGTTTGAGGCATCTGGAGCCAAATATGTT
GTCTTCACAAGCAAACATGGTGAGGGTTACACAAACTGGCCTTCTGCAACTTCTGTCAAC
TGGAACTCAATGGATGTTGGGCCAAAACGTGATATTGTTGGAGACTTAGCAAATGCAATA
AAAAACAGGACGTCTCTCCGCTTTGGACTTTACCATAATCTACATGACTTTCTAAACCCG
CTTTACCTCAATGACAAACAAAATAACTTTACAACTAACGAATTTCCAAGAATGAAGTCG
ATGCCTGAACTGTATGACATAGTCAGTAGATACAAACCTGACATTGTTTGGTCAGATGGT
GATCAGGGAACTAACTCAAGCTATTGGAACAGTGCAGAATTTGTTGCTTGGCTTTACAAT
GAATCTCCTGTGAAGGATATTGTTGTCACCAATGATAGATGGGGTCGGGATGTTTTATGC
AAGCATGGAGGGTTTTTGACATGTGATGACAGATACAATCCCCATACTCTGCAAACAAGA
AAGTGGGAAAATGCTTTAACTATTGATAAACATTCCTGGGGATATAGAAGGAATGCAAAC
TTCAATGACTTTATGTCAATCAATGAACTGCTGCAGCAACTTGTGACAACCATCAGCTGC
AATGGCAACATGCTAATGAATGTTGGTCCAACAAAAGAAGGAACAATCACACCAATATTT
GAAGAGCGACTTCGACAAATGGGTGAATGGCTTAATGTAAATGGGGAAGCAGTTTACAGC
AGTAAGCCCTGGAAACATCAGAATGATCAAACAAATAAGGATGTTTGGTACACCATGAAC
GGAAAACATGTATATGCTTTCAGTTTTTCATGGCCTGATTCCAACATTCTTGAGTTGGGT
TCCCCAATTTCAACTTCTTCTGCCTCTGTTGATTTAGTCGGAGGTGCATCCCTGCTTACA
TGGCAATCCATAAGTCCTGGTGGTGTTAAAATTACATTGCCAGTTCTAAATCCAGCCTTG
ACCAAAGCAAAATGGGTTTATGTCTTTCGTTTGATAGGTTTTGTTTGA
| PIRSF |
FUC_metazoa-typ (IPR016286) - T[3-419] 4.6E-117 |
| PANTHER |
Glyco_hydro_29 (IPR000933) - T[7-451] 8.6E-201 |
| Pfam |
Glyco_hydro_29 (IPR000933) - T[13-356] 1.1E-113 |
| SMART |
Glyco_hydro_29 (IPR000933) - T[20-402] 2.7E-206 |
| SUPERFAMILY |
Glycoside_hydrolase_SF (IPR017853) - T[20-359] 1.03E-108 |
| PRINTS |
FUC_metazoa-typ (IPR016286) - T[80-95] 8.3E-63 - T[119-135] 8.3E-63 - T[138-156] 8.3E-63 - T[206-222] 8.3E-63 - T[234-255] 8.3E-63 - T[309-330] 8.3E-63 - T[342-364] 8.3E-63 |
| Gene3D |
Glyco_hydro_b (IPR013780) - T[360-450] 2.7E-8 |
| Pfam |
Fucosidase_C (IPR031919) - T[367-451] 7.9E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUCO2_HUMAN | 54.464 % | 509 | 3.49E-179 |
| FUCO_HUMAN | 51.843 % | 497 | 1.05E-174 |