- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S26.g01045.01.t
Possible name(s)
FUCA1; FUCA2
Gene model
Location
S26 [87,720 / 91,140]
Amino acid sequence
Length: 453
>Phmamm.CG.MTP2014.S26.g01045.01.p
MKFACVLAVLVISGCSAEYKPTWDSLDKRPLPSWYDEAKLGIFIHWGVFSVPSFGDGFLA
EWFWYYWKNGNPDAKYFMHKNYAPGFTYADFAPQFTAEFFDADKWADLFEASGAKYVVLT
SKHHEGYTNWPSDSSFNWNSMAVGPKRNIVGEFANAINKKGALRLGLYHSLFEWFNPKYL
EDKKKNFTTDTFVTSKTMPELYYLVNHFKPDIVWSDGDWEASENYWKSKEFLAWLYNKSP
VKDVVVTNDRWGKEALCKHGGFLTCQDRYNPGTLQKRKWENAMTIDKGSWGYRRNVDFKA
YMSINELLQKFVVTISCNGNMLMNVGPTKEGTIIPIFEERLRQMGEWLKLNGEAVYSSKP
WKHQNDSMNSNVWYTMNGNKVYAFSFSWPDSGILEIGSPIVTSKSASIELIGGGSSLTWE
PLSPTGVGIVMPIVNPASSKAKWVYVFRLIGFN
Nucleotide sequence
Length: 1,362
>Phmamm.CG.MTP2014.S26.g01045.01.t
ATGAAGTTCGCTTGTGTACTCGCCGTTTTAGTCATTTCTGGCTGTTCAGCGGAGTATAAG
CCGACATGGGATTCACTGGACAAGCGACCATTACCATCATGGTATGATGAAGCAAAACTT
GGCATCTTTATTCATTGGGGTGTGTTTTCAGTGCCAAGTTTTGGTGATGGGTTTCTGGCT
GAATGGTTCTGGTATTATTGGAAGAATGGAAACCCTGATGCCAAATATTTCATGCACAAA
AACTATGCACCAGGTTTCACCTATGCTGACTTTGCACCCCAGTTTACTGCTGAGTTCTTT
GATGCAGACAAGTGGGCTGATCTTTTTGAGGCATCTGGGGCCAAATATGTTGTCCTAACC
AGCAAACATCACGAGGGTTACACAAACTGGCCATCTGATAGCTCTTTTAACTGGAACTCA
ATGGCTGTTGGACCAAAACGGAACATAGTGGGAGAGTTTGCAAATGCAATCAATAAGAAA
GGAGCTCTTCGGCTTGGTTTGTACCACTCACTGTTTGAGTGGTTTAACCCCAAATATCTT
GAGGACAAAAAGAAAAATTTTACAACTGATACATTTGTGACGTCAAAGACAATGCCTGAG
TTGTATTACCTTGTCAATCATTTCAAGCCTGATATTGTTTGGTCTGATGGTGATTGGGAA
GCAAGTGAAAACTACTGGAAAAGTAAGGAGTTCCTGGCCTGGCTGTACAACAAAAGCCCA
GTGAAGGATGTTGTTGTAACCAATGACAGATGGGGCAAAGAGGCTTTATGCAAGCATGGT
GGCTTTCTGACATGCCAAGACAGGTACAATCCTGGAACTTTGCAGAAGAGAAAATGGGAG
AATGCCATGACTATTGACAAAGGATCATGGGGATACAGAAGAAATGTTGACTTCAAAGCA
TACATGTCAATCAACGAGTTACTGCAGAAATTTGTGGTTACTATCAGTTGCAATGGTAAC
ATGCTAATGAATGTTGGTCCTACCAAAGAAGGAACAATTATTCCAATTTTTGAAGAGCGA
CTTCGACAGATGGGTGAATGGCTCAAATTAAATGGGGAAGCAGTGTACAGCAGTAAGCCA
TGGAAGCATCAGAATGACTCCATGAATTCTAATGTTTGGTATACTATGAATGGAAATAAA
GTATATGCCTTCAGCTTTTCATGGCCTGACTCTGGCATTCTTGAGATCGGATCCCCAATT
GTCACTTCCAAATCTGCCTCTATCGAGTTAATTGGGGGTGGCAGTTCATTGACTTGGGAA
CCATTAAGTCCAACTGGTGTGGGAATTGTTATGCCAATTGTAAATCCAGCATCATCCAAA
GCAAAATGGGTTTATGTGTTTCGTCTCATAGGTTTTAATTAA
| PIRSF |
FUC_metazoa-typ (IPR016286) - T[3-418] 1.1E-123 |
| PANTHER |
Glyco_hydro_29 (IPR000933) - T[5-449] 1.6E-204 |
| Pfam |
Glyco_hydro_29 (IPR000933) - T[16-353] 6.2E-117 |
| SUPERFAMILY |
Glycoside_hydrolase_SF (IPR017853) - T[18-356] 1.33E-108 |
| SMART |
Glyco_hydro_29 (IPR000933) - T[18-399] 5.0E-212 |
| PRINTS |
FUC_metazoa-typ (IPR016286) - T[77-92] 4.4E-64 - T[116-132] 4.4E-64 - T[163-182] 4.4E-64 - T[203-219] 4.4E-64 - T[231-252] 4.4E-64 - T[306-327] 4.4E-64 - T[339-361] 4.4E-64 |
| Gene3D |
Glyco_hydro_b (IPR013780) - T[357-447] 7.5E-7 |
| Pfam |
Fucosidase_C (IPR031919) - T[364-449] 2.6E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUCO2_HUMAN | 54.233 % | 498 | 4.4E-175 |
| FUCO_HUMAN | 53.103 % | 496 | 2.46E-174 |