- Transcript 'Haaura.CG.MTP2014.S5...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- EST 'AHC0AAA224YG15_RM1' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S26.g01046.01.t
Possible name(s)
FUCA1; FUCA2
Gene model
Location
S26 [91,966 / 95,135]
Amino acid sequence
Length: 457
>Phmamm.CG.MTP2014.S26.g01046.01.p
MKSVISLSLLSMCIAFCNANYEPNWDSLDSRPLPTWYDEAKFGIFIHWGVFAVPSYGQGA
ASEWFWWNWQGVSSPAEVYFMQQNYPPDFTYGDFAKQFTAEFYDADKWAEIFQASGAKYI
VLTSKHHEGYTNWPSATSWNWNSMDIGPKRDIVGELANAIRNKTSIHFGLYHSLFEWFNP
SYLQDKESGFKTDKFVKEKTMPELYDIVNRYKPDVIWSDGQWEANSSYWSSPDFLAWLYN
ESPVKNTVVTNDRWGSDTLCKHGGYLTCSDRYNPGTLQTRKWENAMTIDKGSWGYRRNIQ
FDQYMTIEELLQELVTTISCNGNILVNVGPTKEGTITPVFEERLRQMGEWLGVNGEGVYS
SKPWTHQNDTMTKGVWYTKNEDKIYAFSFSWPDSGVLILGAANPKPGATIDLLGGDSALK
WEPLQPRGVGILLPVVNPATIKAKWVYVFRLTGFESA
Nucleotide sequence
Length: 1,374
>Phmamm.CG.MTP2014.S26.g01046.01.t
ATGAAGAGTGTGATTTCTTTGTCATTGTTATCAATGTGCATTGCATTCTGCAACGCCAAT
TATGAACCAAACTGGGATTCTTTGGACTCCAGACCGTTGCCAACGTGGTATGATGAAGCT
AAATTTGGCATCTTTATTCACTGGGGAGTCTTTGCAGTTCCAAGTTATGGGCAAGGTGCT
GCCTCTGAATGGTTTTGGTGGAATTGGCAAGGGGTGTCCAGTCCAGCTGAAGTGTACTTT
ATGCAACAGAACTACCCACCAGATTTTACCTATGGTGACTTTGCCAAACAATTCACTGCA
GAGTTTTATGATGCTGACAAATGGGCAGAAATCTTTCAGGCATCTGGAGCCAAGTACATT
GTGCTGACAAGTAAGCACCATGAAGGTTACACAAATTGGCCTTCTGCTACTTCCTGGAAC
TGGAACTCTATGGATATTGGTCCTAAACGGGATATAGTTGGTGAATTGGCAAATGCAATC
CGAAACAAAACATCAATACACTTCGGACTTTACCATTCACTTTTTGAATGGTTTAACCCA
TCCTATCTTCAAGATAAAGAAAGTGGTTTTAAAACAGATAAATTTGTCAAGGAAAAAACA
ATGCCTGAACTCTATGATATTGTGAACCGTTACAAACCAGATGTAATCTGGTCAGATGGC
CAATGGGAAGCAAACTCCTCATATTGGTCAAGCCCAGACTTTTTGGCTTGGCTTTACAAT
GAAAGTCCAGTAAAGAATACTGTTGTCACAAATGATCGATGGGGCAGTGACACACTATGT
AAGCATGGTGGCTACCTTACATGCTCTGATAGATACAACCCAGGCACCCTTCAAACAAGA
AAGTGGGAAAATGCTATGACTATTGACAAGGGCTCCTGGGGTTACAGAAGAAATATCCAA
TTTGATCAGTACATGACAATTGAAGAGTTGTTGCAGGAGCTAGTTACCACAATCAGTTGC
AATGGCAATATTCTTGTAAATGTGGGGCCGACTAAAGAAGGAACAATTACCCCTGTGTTT
GAGGAACGATTAAGACAGATGGGTGAATGGCTCGGAGTAAATGGTGAAGGAGTGTACAGT
AGTAAGCCATGGACACACCAGAATGACACCATGACTAAAGGTGTTTGGTACACCAAGAAT
GAAGACAAGATATATGCCTTCAGCTTTTCATGGCCAGATTCAGGTGTGTTAATTCTGGGA
GCAGCAAATCCAAAACCAGGTGCAACCATTGATTTGTTGGGAGGTGATTCAGCACTCAAA
TGGGAACCATTACAACCTAGAGGTGTTGGAATTTTGTTGCCAGTTGTAAACCCTGCAACT
ATCAAGGCAAAATGGGTTTATGTCTTCAGATTGACAGGATTTGAATCAGCCTAA
| PIRSF |
FUC_metazoa-typ (IPR016286) - T[1-417] 2.6E-126 |
| PANTHER |
Glyco_hydro_29 (IPR000933) - T[8-452] 6.0E-209 |
| Pfam |
Glyco_hydro_29 (IPR000933) - T[12-356] 2.6E-122 |
| SMART |
Glyco_hydro_29 (IPR000933) - T[20-402] 7.7E-225 |
| SUPERFAMILY |
Glycoside_hydrolase_SF (IPR017853) - T[21-359] 2.95E-113 |
| PRINTS |
FUC_metazoa-typ (IPR016286) - T[80-95] 2.0E-66 - T[119-135] 2.0E-66 - T[138-156] 2.0E-66 - T[206-222] 2.0E-66 - T[234-255] 2.0E-66 - T[309-330] 2.0E-66 - T[342-364] 2.0E-66 |
| Gene3D |
Glyco_hydro_b (IPR013780) - T[360-449] 7.5E-8 |
| Pfam |
Fucosidase_C (IPR031919) - T[367-452] 1.2E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUCO2_HUMAN | 57.823 % | 527 | 0 |
| FUCO_HUMAN | 54.358 % | 513 | 1.14E-180 |