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  1. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S26.g01051.01.t

Possible name(s)

KDSR; RDH8; SDR16C5

Gene model

Phmamm.CG.MTP2014.S26.g01051

Location

S26 [138,031 / 142,384]

Sequences

Amino acid sequence

Length: 331

>Phmamm.CG.MTP2014.S26.g01051.01.p
PVVIIVLLFIVSSRPSRLNVAGSHILITGGSSGIGLEIAKEFARKGGFITLVARNEQKLL
EAKSIVEQHMKGGGERQCVTILPLDVASSAKEVLDGIKSTEERLGPVDYLINCAGISFAG
TFEDTPTEQFELLMKVNYFGSIYCTKAVLPGMKKRKKGRIVFVSSQAGQTGVFGYTAYCP
TKFALRGFAETLQMEVKPYNIAVTVSFPPDTDTPGFHDDDDRKPEETQLISETSGFFMPD
AVGKAIFRDAVRGEFSSTIGLDGFILGQVTAGMSPCNSMLTAFCQIALMGPFRMVSLAYL
KYFDGIVSKCARKRECAVQEEDKDKEASDAS

Nucleotide sequence

Length: 2,294

>Phmamm.CG.MTP2014.S26.g01051.01.t
CCCGTTGTGATTATTGTACTGCTTTTCATTGTCTCTTCACGTCCAAGTCGTTTGAATGTT
GCCGGATCGCATATTTTGATCACTGGTGGGTCATCTGGCATTGGCCTCGAAATAGCCAAA
GAGTTTGCAAGGAAAGGAGGGTTTATCACTTTGGTTGCTCGCAATGAACAAAAGCTTCTG
GAAGCTAAAAGCATTGTTGAACAACACATGAAAGGTGGAGGAGAACGACAATGTGTAACT
ATTCTTCCTCTTGATGTAGCTTCATCAGCTAAAGAGGTTCTGGATGGAATCAAATCAACA
GAGGAGCGTTTGGGTCCAGTTGACTACCTTATTAACTGTGCAGGCATCTCATTTGCTGGA
ACTTTTGAAGATACGCCAACTGAACAGTTTGAACTCTTAATGAAAGTCAACTATTTTGGT
TCTATTTATTGCACAAAAGCTGTTTTGCCTGGAATGAAAAAGAGGAAGAAAGGTCGAATT
GTATTTGTCAGCTCTCAAGCAGGGCAAACTGGTGTGTTTGGATATACAGCTTATTGTCCT
ACCAAGTTTGCTCTTCGTGGCTTTGCAGAAACTTTACAAATGGAGGTGAAACCATACAAT
ATTGCAGTTACTGTATCCTTTCCCCCTGATACAGACACACCAGGATTTCATGATGATGAT
GATAGAAAACCAGAGGAAACACAGCTGATTTCTGAGACTTCTGGCTTCTTTATGCCTGAT
GCTGTTGGCAAAGCTATTTTTAGGGATGCTGTGCGGGGAGAATTCAGCTCCACAATTGGT
TTGGATGGATTCATTTTAGGGCAAGTAACTGCTGGAATGTCGCCATGTAATTCCATGCTG
ACAGCGTTCTGTCAAATCGCATTGATGGGTCCTTTCCGCATGGTGTCGCTTGCTTATCTC
AAGTATTTCGACGGTATCGTGTCGAAATGTGCTCGGAAAAGAGAATGTGCTGTACAAGAA
GAGGACAAGGATAAAGAGGCTAGTGATGCTTCTTAAGGACCGGAAAAACGGCTAAGAAGA
GTTTGTGCATGTTTGGTAAACGTTGCAATGGGAAAGACGTTTAATCAAGACAAAAATCTT
TCTTACAAAAGTTTTTTTTTCAACAACAAAACGGAGCACAGAATTTATGTGTGCGTGATT
CGCAATCAACACATCGAAAAATGTTGAAACACTTGATTTCGCGTCCAATATTTCTTTCAT
TTTTTATTGCTGCACACGAATTTGACCCTTTTAAATCATTGGCATGCGCTTTTAATATCT
ATCTTATTGTATGTCACATCGGATGCTACTTTTATGTAAACTCATAGCACTGTTGCAGAG
TCTGGAACTATAAGCTTCGAGTCTCAAGTTATCATGAAATCCAATTCCTTAAGGTTATCA
TGTCGGTTTCGAGAGATCAAACACTTCTGGTTGTGCAAGTTTGCAATCACCTGTGAAATT
ATTGTTCTATCGTCATAGTAAAAACAGTGTTGTGTGATCATTCTCAACTTTTTGGTGGTG
AAGTGTTTTAAGCAAAGAAGCTACCTGGATATCTAACAACAGAAAATCATACCAACATCT
TCAATGTACAAACTTCACCAAAACGGCCTCAACTATTTGTTTTAGAAAATGGAAGCGGTT
TGTTTGTGAAGATTTCGGTTGCTCTCACGCGGGTAAAGAATAACCCGAAAAGCACCCGAC
GTCCAGCTGCCATGTGACCATATGTCGGGCGACGACTAGTGGATCATAAGTAAACACTGC
GCCCTGTTCCACTCCTAAATTAAATGTTCAGTGTGCACCGGTTGTCAAATCGTAAATGTT
CATTAATCATTTTGTGGTCGGTCAAACCAACGCTCTTTTATATTTGCGAAGGATTTGTGT
GGTTTTGCAACCGCCGGTTGTTCTGTGGGCAGAAATGATAGTAGGTAAGAAGTGAAGATT
GGCAGTAAACGGTAAGAAAAAATAGAAATAAGGCACAGAAACAACAACAAAATGTAACAC
AAAACTTAAAAAGGTTAAACTAAAAGCATATTGTTCTAGAAAAGCGACTCGCAATCTAAA
TAAAATTAGTGGCAATGAACGCAGCAGCAGCAATTGCACTACACTATACGCAGTAGGCTA
CATTTCTAGCAATCACATACTAAAAAGGTTAAACTGAAAGCATATTGTCAATGGCAATGA
AGGCTGCAGTAGCAAATGTAAAATGTACGACACTGCTCAACACATTTCCAGCACTCACAT
CTGCTGCTCGATGGCGCCAATGAGCAGCTGAACAATCTTTCGAGTCCTGGGCAGCAATGC
GAGGCGGCGGTCAA

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[19-254] 3.4E-58
PRINTS
SDR_fam (IPR002347) - T[24-41] 6.7E-18 - T[105-116] 6.7E-18 - T[105-116] 4.3E-6 - T[152-168] 6.7E-18 - T[158-166] 4.3E-6 - T[178-197] 6.7E-18 - T[178-197] 4.3E-6
Pfam
SDR_fam (IPR002347) - T[24-219] 2.9E-51

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
KDSR_HUMAN 50.799 % 330 7.55E-113
DRS7B_HUMAN 35.263 % 99.4 8.31E-24
RDH8_HUMAN 35.602 % 100 1.81E-24