Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S2708.g16990.01.t

Possible name(s)

LRRC74B; NLRP5; NOD2

Gene model

Phmamm.CG.MTP2014.S2708.g16990

Location

S2708 [2,778 / 4,611]

Sequences

Amino acid sequence

Length: 218

>Phmamm.CG.MTP2014.S2708.g16990.01.p
MLELRRNKVTDESASAIASCIHNIEELHLCYCKLTIVGICKIAEAISNLSKPMKTLNISG
NKLDENAENCLLDCLHNIQEELKVSNSDISADFESKYSRLPQPIKLLKLGGNKVTDESAS
AIASCIHNIEELILMECKLTSVGICKIAKSISNLSQPIKLLDLRLNKVTDEIASAIASCI
HNIEKLDLQSCKLTSVGICKIAVAISNLSQPKPKLTLE

Nucleotide sequence

Length: 657

>Phmamm.CG.MTP2014.S2708.g16990.01.t
ATGTTAGAACTTCGTCGGAACAAAGTAACTGATGAAAGTGCATCTGCAATAGCTTCCTGT
ATTCATAATATTGAGGAACTGCATCTGTGCTATTGTAAACTGACAATTGTTGGAATTTGT
AAAATTGCAGAAGCTATTTCCAACCTTTCAAAACCAATGAAAACACTTAACATCAGTGGA
AACAAACTTGATGAGAACGCAGAAAATTGTTTGCTGGATTGTTTGCACAACATCCAAGAA
GAACTTAAAGTATCAAATTCAGACATAAGTGCAGACTTTGAATCAAAATACTCAAGATTA
CCTCAACCAATTAAATTATTGAAGCTTGGGGGGAACAAAGTAACTGATGAAAGTGCATCT
GCTATAGCTTCCTGTATTCATAATATTGAGGAACTGATTCTGATGGAATGTAAACTGACA
AGTGTTGGAATTTGTAAAATTGCAAAATCTATTTCCAACCTTTCACAACCAATTAAATTA
TTGGACCTTCGTTTGAACAAAGTCACTGATGAAATTGCATCTGCAATAGCTTCCTGTATT
CATAATATTGAGAAATTGGATCTACAAAGTTGTAAACTGACAAGTGTTGGAATTTGTAAA
ATTGCAGTAGCCATTTCCAACCTTTCACAACCAAAACCCAAACTGACACTGGAGTAA

InterProScan

Gene3D	LRR_dom_sf (IPR032675) - T[1-216] 2.6E-33
Pfam	Leu-rich_rpt (IPR001611) - T[2-18] 0.29 - T[106-123] 0.24 - T[159-177] 0.023 - T[181-201] 0.83

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value