Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'AHC0AAA192YK06'
  2. Clone 'cima8107735'
  3. Clone 'cijv031b03'
  4. Transcript 'Harore.CG.MTP2014.S9...'
  5. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S270.g06450.03.t

Possible name(s)

MECOM; PLAG1; ZNF418

Location

S270 [51,079 / 54,369]

Sequences

Amino acid sequence

Length: 266

>Phmamm.CG.MTP2014.S270.g06450.03.p
AQQIPVPYTNCHGMYSVHPTSMADYGANATTSTLHDTNFNGNLPSGSISTYSTYQEAGPN
SNATLFEQNLSTGNNKQQKSHLEKLLSETSTDNSNFIVSDKRKSLGRLSDENTKAPNSRK
SYKLYNISCNFSKLKQRLLRYKCQHCPGRQFSSLGLLKSHIAIVHHSTTRRHLCLLCGHS
FSSNLLLMAHVSKRHTNRPKRLMASRKKRAKRMSFENSPHGSGIINSKELPDQCSPDIQQ
MFNKEQTFQSNMHSVVNLPTHSLVPT

Nucleotide sequence

Length: 2,979

>Phmamm.CG.MTP2014.S270.g06450.03.t
GTGCTCAGCAAATTCCTGTACCGTACACAAATTGCCATGGCATGTACAGTGTTCATCCTA
CTAGCATGGCTGACTATGGAGCTAATGCCACTACCTCAACTCTGCATGACACAAATTTCA
ATGGAAACTTGCCTTCTGGAAGTATCTCTACCTATTCGACATACCAAGAAGCTGGACCAA
ATTCCAATGCAACATTATTTGAACAGAACCTGTCAACTGGGAATAATAAGCAACAAAAAT
CACATTTAGAGAAGCTTCTGAGTGAAACATCTACTGATAACAGCAACTTCATTGTAAGCG
ACAAAAGGAAATCACTTGGAAGACTTTCGGATGAAAACACAAAGGCTCCAAACTCCAGAA
AATCTTACAAACTGTATAACATAAGCTGCAACTTTAGTAAGCTTAAACAGCGGTTGCTTC
GTTACAAATGCCAGCATTGCCCTGGACGACAGTTTTCCAGCCTGGGCCTGTTGAAAAGTC
ACATTGCAATTGTGCATCATAGCACGACACGACGTCATCTTTGCCTTCTTTGTGGTCACA
GTTTTTCATCCAACCTCTTGCTGATGGCCCATGTCAGCAAACGTCACACAAACAGACCAA
AGCGTCTAATGGCATCAAGGAAAAAGCGTGCAAAGAGAATGTCTTTTGAAAACTCGCCAC
ATGGAAGTGGGATAATAAACAGCAAAGAATTGCCAGATCAGTGTAGCCCTGACATACAGC
AGATGTTTAACAAGGAGCAAACCTTCCAATCCAACATGCACTCGGTTGTGAATTTGCCCA
CACATTCGTTAGTACCTACCTAAGTGAGCTGCCCCTGACAAGATCATGTGGTGGTTTTAT
TGCATTGTACTGTACACAAATTATTGTGCTGCATGAATTTCTGTATTCTGTTTTGTACAA
ACCTTACCTTTTTAGTTACTCCATCACTACCTAGTTTTTAGCAGTAGCTGACTTTTTATT
ATTTGTAGCAAACACGTAGACTGCTTTTGTGTAGTTGTTGTACCTGACATTGCCAAGAAA
AGAAGGAATTTTATGACAAACATTTGTCATAGTGAACAAGTCATGAGTGATGACCAAATA
CTTTTGCTTGCCGTTTCCTTCAAGTGACTGTTTTGCCTCGAAGTGTGGTGCTGCATTTTT
AGTACAAACCTATTATCACCGCTTTCACAGTACAACCAAAAAGTCAGTTGCTTTGTATGA
CACTGTCTGCAATTTTTGTACCCAAAGATTTGCGAGAAGTGTTGTACATATGTCTTCATT
TTAATACTTGTTCACTGTTAATCTACTACCAAATACATTTCTGACTTTTTTGCCTCAATG
CTTGATGTCAACATTCATTTGGTGCTGTTGCTGTTTTTTAGTTTGAACAAAATAATCTGA
AACAAAAATAAAGTTAACAATAGTGGAGGATTGTGTCATGTCATTATTGTTGCACTTTTT
ATCTAATCTCGGTGGTGTTTTTATTACATTTGTATTTTTAACTTCTGTAATTTGTGTGAG
ACTTGCACTGCCCTATTTAAAATTGCAGTTTCAAACTTGTGGTCTGTTGGCATTTTACTG
TAAAATGACCAGTGGTGCTATACCACTTTCCCATGACGACTTTTGTCAAGCTTGTTAGTT
GTTACTGTTGCTAGTATTATACACAAGAGCTGACCAACATTCATCTGTCGATTTTAACAG
TGTTGCAACTTGCTCTGCCACAACACTGAAAAATGGTTACACTTGGCAGTATTGCAGTAT
TTTCAAGTAATTGTGCCATCTGTATTTGTGTATTTTAATAGTGTACATCTCATTTTGTGC
CTCACACACTGCTGTTATTTTCACCAGATCAAATTTTTAATCACACTTGATATAATTTTG
CCCACTGCTTTGTTGTACATATGTCATTGTTGCAGTTGGAGATCATGTAAGCAATAATAA
TTTTCGGAATCGTTTAGAAATGTCTTTTGCTCAATACTCAATATAACGCATTTAGATAAT
GTGTACTTTAAAATTGTGTCTTGTTTTGTTAGTTATGCAGAGCTAAACTATGACATTGTG
AGGGTAACATAAGCATGGTTTAAAAATAACTCTGTGAACTCTAGTTAATTACATCATTGA
CTATACAACATACTGTCAAAACAAAAGAATGTGTTTCTTAGGCGTTTTTGAACATGTTTT
TTCGATTAGAGTGGGATGAACCTGACATAGGTAGTTGCACTGTAAATGCACAAAATGCTC
CTACCCTCATGATGGTGACATCATTTTTTGGTTCATGTAAATGGATATTGGTGTAATTCT
TTTATTCTGCAAATGACCATAAAACAACAGGTTGTAGTTTACTAGATATATATCAAAAAA
ATAAAATTATTTGGAATCCTTTTCTTTCTTGTAAAGAAGTTTCCATAGCTCATGTTCTTT
TAACATGGATTTTGTTGGCTCTGGTTCTTTTCTTCGTACAAGGTGTTTTAAAAATCTTTC
AAACAAATGTCCTCCACGTTTTTTGAAGTCATTTAGTTCATTATATGGTCTGTAATGATG
CTTTGATAACAAAATCAATGTTTCACAACCAAGAAGTTGACGTTTGACCAAAATTTGCTT
AAGTGACATTTTGAAAAAAATATAATTCAGTCAGTTTCTTTTTTAACATCAAATTGAGGA
TTTGGCTTTTGGGTTTCTTTCAGTAACTCATGCAGCTGCAAAATTTGGTCTTCAGAAAAC
TCTTCCAAGGCATCAACTGGTAAGCTGGAACCAACTTTAGAATGTAAAGATTCTTGTTGG
AGTTGTGCTTGTAGAGTTTTTGCGTAGGTTTGCCACTGACTCATAAATTCTGGAACAAAC
TCTGGTGCACAATTTTTGTGTGCACGAAATTCACTTTTAACGTACTGGTCGCCAACAGTT
TTAAGATCAATTGGTAGACCTTCATGTAAGCGCAGTATAACTTTGTACAGCTGTCGTACT
TTGCTAGTGTGCTTCAAAGACATTACATAAAAAAACCTT

InterProScan

SMART
Znf_C2H2_type (IPR013087) - T[141-165] 0.065 - T[172-195] 3.8
ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[172-200] 9.141
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[174-195] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value