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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S7...'
  2. Clone 'AHC0AAA39YB05'
  3. Transcript 'KH2012:KH.L3.8.v3.C....'
  4. Transcript 'Moocul.CG.ELv1_2.S77...'
  5. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S271.g06478.01.t

Possible name(s)

RPS15

Location

S271 [122,758 / 124,950]

Sequences

Amino acid sequence

Length: 112

>Phmamm.CG.MTP2014.S271.g06478.01.p
MELYCARPRRSFTRGVKRKHNALLKRLRKAKKNAPPMEKPEVVKTHLRNMIIEPEMVGSM
VGVYNGKTFNQVEIKPEMIGRYLGEFSITYKPVKHGRPGIGATHSSRFIPLK

Nucleotide sequence

Length: 339

>Phmamm.CG.MTP2014.S271.g06478.01.t
ATGGAACTTTACTGTGCACGACCACGCAGATCTTTTACAAGGGGTGTTAAGCGCAAGCAC
AATGCTCTTCTTAAGCGTCTGAGAAAGGCCAAGAAAAATGCTCCACCCATGGAAAAGCCT
GAAGTGGTTAAGACACATCTTCGTAACATGATTATCGAACCTGAGATGGTCGGAAGCATG
GTTGGGGTCTACAATGGAAAAACTTTCAACCAAGTTGAAATCAAGCCTGAAATGATTGGG
CGCTACTTGGGCGAGTTCAGCATCACATACAAGCCTGTGAAACACGGTCGGCCAGGTATT
GGTGCCACTCACTCCTCACGTTTCATCCCACTCAAGTAA

InterProScan

TIGRFAM
Ribosomal_S19A/S15e (IPR005713) - T[1-112] 2.6E-56
Gene3D
Ribosomal_S19_SF (IPR023575) - T[1-112] 2.2E-56
PANTHER
Ribosomal_S19 (IPR002222) - T[1-112] 1.6E-61
PIRSF
Ribosomal_S19 (IPR002222) - T[1-112] 2.2E-36
Hamap
Ribosomal_S19 (IPR002222) - T[8-101] 21.074
Pfam
Ribosomal_S19 (IPR002222) - T[10-95] 1.5E-36
SUPERFAMILY
Ribosomal_S19_SF (IPR023575) - T[16-96] 3.66E-31
PRINTS
Ribosomal_S19 (IPR002222) - T[45-64] 1.2E-12 - T[65-77] 1.2E-12 - T[77-92] 1.2E-12
ProSitePatterns
Ribosomal_S19_CS (IPR020934) - T[65-89] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS15_HUMAN 86.607 % 184 1.3E-61