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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S271.g06479.01.t

Possible name(s)

RPS15

Location

S271 [122,844 / 125,820]

Sequences

Amino acid sequence

Length: 125

>Phmamm.CG.MTP2014.S271.g06479.01.p
FRPVDIIMTEPAQVPKRRTFRKFSYRGVDLDQLLDMSREQLMELYCARPRRSFTRGVKRK
HNALLKRLRKAKKNAPPMEKPEVVKTHLRNMIIEPEMVGSMVGVYNGKTFNQVEIKPEMI
GRYLG

Nucleotide sequence

Length: 378

>Phmamm.CG.MTP2014.S271.g06479.01.t
GGTTCAGGCCAGTGGACATCATCATGACGGAGCCAGCACAAGTCCCAAAGAGGAGAACTT
TTCGCAAGTTCAGCTACAGAGGCGTCGACCTCGATCAGCTTCTTGACATGTCAAGGGAAC
AGTTAATGGAACTTTACTGTGCACGACCACGCAGATCTTTTACAAGGGGTGTTAAGCGCA
AGCACAATGCTCTTCTTAAGCGTCTGAGAAAGGCCAAGAAAAATGCTCCACCCATGGAAA
AGCCTGAAGTGGTTAAGACACATCTTCGTAACATGATTATCGAACCTGAGATGGTCGGAA
GCATGGTTGGGGTCTACAATGGAAAAACTTTCAACCAAGTTGAAATCAAGCCTGAAATGA
TTGGGCGCTACTTGGGCG

InterProScan

PIRSF
Ribosomal_S19 (IPR002222) - T[8-125] 5.3E-25
Gene3D
Ribosomal_S19_SF (IPR023575) - T[10-125] 5.4E-55
PANTHER
Ribosomal_S19 (IPR002222) - T[13-125] 8.0E-57
TIGRFAM
Ribosomal_S19A/S15e (IPR005713) - T[20-125] 6.8E-49
Pfam
Ribosomal_S19 (IPR002222) - T[51-125] 1.5E-28
SUPERFAMILY
Ribosomal_S19_SF (IPR023575) - T[57-125] 9.94E-24
PRINTS
Ribosomal_S19 (IPR002222) - T[86-105] 1.3E-9 - T[106-118] 1.3E-9 - T[118-125] 1.3E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS15_HUMAN 83.636 % 174 1.81E-57