- Transcript 'KH2012:KH.C11.112.v3...' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S277.g06568.01.t
Possible name(s)
STRN; STRN3; STRN4
Gene model
Location
S277 [56,004 / 69,101]
Amino acid sequence
Length: 576
>Phmamm.CG.MTP2014.S277.g06568.01.p
QDTHITISRLLLLCCFIMEIDEPSGTNSQGGDSGDGKPTYSMPGILHFIQHEWSRFEMER
AQWDVERAELQARIAFLQGERKGQENLKRDLIRRIKMLEFALKQERAKVHKLRFGNEMSM
DQIINDANDDSKTTEIPTANANMSWRHGRQLLRQYLQEVGYSDTILDVRSQRVKALLGNN
YDMNKPVENDNKMVNGDMSDEEKAKNKSGSFNIPIVNDQADSEVLHDFDFLNTADNDDDD
VQMQDEDVITSGDHQRKARANKDEVDGMSVETATAIAEFDFLNPDAEEPDDTKATDWTID
PNKLNAMKQQFLLEKKQQKKKGMKRPAKKHLQDMLQTFQGAEMQKTNDDIDIHIPEEENL
PFTVGGGQTGDESIETALGLGALAGLTVANEADPLAYDMSATKETFRKTWSPKFTLRSHF
DGIRAIRFLPTESAVLTASEDNTMKLWNLNKPLPNKKSQALDVEPIYSFRGHVGAVLCLD
VSADGVFCFSGGIDSSVRCWALPNINIDAYDTYDSSLAGEILVGHTDAVWSLSYSNTRQQ
LLSASADNSIKLWRPTSNDPLVQTYTVDGELSLHAT
Nucleotide sequence
Length: 1,729
>Phmamm.CG.MTP2014.S277.g06568.01.t
GCAGGACACACATATTACAATCAGTAGGTTGTTGTTGTTGTGCTGCTTCATTATGGAGAT
TGATGAACCAAGTGGAACAAACAGCCAAGGTGGCGACTCGGGAGATGGGAAACCAACATA
TTCCATGCCAGGAATTCTCCACTTCATTCAGCATGAATGGTCGCGATTTGAGATGGAAAG
AGCTCAATGGGACGTAGAGCGAGCTGAACTGCAGGCTAGAATTGCTTTCCTGCAAGGAGA
GAGAAAGGGACAAGAAAATTTGAAACGAGATCTAATCAGAAGAATAAAGATGTTAGAATT
TGCACTGAAACAAGAACGAGCCAAAGTCCACAAGTTGAGATTTGGAAATGAAATGAGCAT
GGACCAAATAATTAACGACGCTAATGATGACTCCAAAACCACTGAAATTCCAACTGCAAA
TGCCAACATGTCATGGAGACATGGAAGACAATTGCTTCGTCAATATTTGCAGGAGGTTGG
ATATAGTGACACAATACTCGATGTGAGGTCACAAAGAGTGAAGGCTCTGCTTGGAAACAA
TTATGACATGAACAAACCAGTGGAAAACGACAACAAAATGGTGAATGGTGACATGTCAGA
TGAAGAGAAAGCAAAAAACAAATCTGGAAGTTTCAATATCCCGATTGTCAACGACCAAGC
AGACAGTGAAGTATTACATGACTTTGATTTCCTCAACACCGCTGATAATGATGATGATGA
CGTCCAGATGCAGGACGAAGATGTCATTACATCCGGGGATCACCAGAGAAAAGCGAGAGC
TAACAAGGATGAGGTGGATGGGATGAGTGTTGAAACTGCTACAGCCATCGCAGAGTTTGA
TTTCTTGAACCCAGATGCTGAAGAACCAGACGATACTAAAGCCACTGATTGGACGATTGA
CCCGAACAAACTGAATGCAATGAAACAACAATTTCTACTCGAAAAAAAGCAACAGAAAAA
GAAAGGAATGAAAAGACCAGCAAAGAAGCATTTGCAAGATATGCTTCAGACATTTCAAGG
AGCCGAGATGCAAAAAACAAATGATGACATTGATATCCATATACCCGAAGAAGAGAACCT
CCCATTCACCGTCGGAGGGGGTCAGACCGGCGACGAATCAATCGAAACTGCACTTGGACT
TGGAGCTTTAGCCGGACTTACTGTGGCCAATGAAGCGGATCCACTTGCTTACGATATGTC
AGCTACTAAGGAGACTTTCCGAAAAACCTGGAGCCCGAAATTCACGCTCCGGAGCCACTT
TGACGGGATCCGGGCGATCCGGTTCCTTCCCACCGAGTCAGCGGTTCTAACTGCGTCCGA
AGACAACACGATGAAATTGTGGAATTTAAACAAACCTCTTCCGAATAAGAAGAGTCAAGC
TTTGGATGTTGAGCCGATCTACAGTTTCCGTGGACACGTAGGAGCAGTTTTGTGTCTGGA
TGTGAGCGCTGATGGGGTTTTCTGCTTCAGTGGAGGAATCGACTCATCTGTAAGATGTTG
GGCTCTTCCTAATATCAACATTGATGCGTACGACACATACGATTCTTCACTGGCCGGAGA
GATATTGGTCGGACACACAGACGCTGTTTGGTCGCTCTCGTATTCCAACACTCGTCAACA
GCTCCTATCTGCTTCAGCTGATAATTCCATCAAATTATGGAGGCCGACTTCAAATGATCC
GCTTGTACAGACTTACACTGTTGACGGTGAGTTGAGTTTACATGCGACG
| Pfam |
Striatin_N (IPR013258) - T[42-167] 2.6E-43 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[408-562] 2.75E-29 |
| SMART |
WD40_repeat (IPR001680) - T[409-448] 2.9E-6 - T[462-501] 1.1E-6 - T[515-554] 4.5E-6 |
| Pfam |
WD40_repeat (IPR001680) - T[411-448] 0.0034 - T[464-500] 4.4E-5 - T[521-553] 6.3E-4 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[416-450] 13.349 - T[469-500] 10.208 - T[522-563] 14.017 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[416-563] 23.44 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[435-449] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| STRN3_HUMAN | 45.25 % | 480 | 1.2E-161 |
| STRN_HUMAN | 45.89 % | 473 | 3.7E-159 |
| STRN4_HUMAN | 41.026 % | 387 | 3.94E-126 |