Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S27.g01115.01.t

Possible name(s)

EMC2; TTC21B; TTC7A

Gene model

Phmamm.CG.MTP2014.S27.g01115

Location

S27 [273,287 / 274,349]

Sequences

Amino acid sequence

Length: 353

>Phmamm.CG.MTP2014.S27.g01115.01.p
MDMTWDEASDTLREWRGMSVRDSEQVVELGERLVRDYSSKLQDELWLVCEQVFIASLDTG
RFDLANLCLDKLKEKFPKSSRVMKLDAMGMEAEGRFDDALNVYDELEKLDQTDAAIRKRK
IAVFKSQGYTSLGGGAMEAEGRFDDALNIYDELEKLDQTDAAIRKRKIAVFKSQGYTSLA
IKHLTIYLQSFMADQEAWMELADLYVKEMDYKKAAFCVEELILSNAFNHLYHQRYAEIMY
TIGGQENLETARRYFAQAVKLSSNTNIRALYGLMLTSGSSTQSRGDTKARNSKQYANWAG
KMVLSKYKNVWSEGGTVDETKFLPKITPESDLPQLTASVSQMLGQISLSDASS

Nucleotide sequence

Length: 1,062

>Phmamm.CG.MTP2014.S27.g01115.01.t
ATGGATATGACTTGGGATGAAGCAAGTGATACATTAAGGGAATGGAGGGGAATGTCAGTA
CGGGACAGTGAACAAGTTGTTGAATTGGGTGAAAGATTAGTTCGAGATTATTCGTCAAAA
CTGCAAGATGAACTGTGGCTTGTGTGTGAACAAGTGTTTATTGCCTCACTAGACACAGGA
AGATTTGACCTCGCCAACTTGTGTTTGGACAAGCTGAAAGAAAAATTTCCAAAAAGTTCA
AGGGTCATGAAACTGGATGCCATGGGTATGGAGGCAGAAGGAAGATTTGATGATGCTTTG
AACGTTTATGATGAGCTTGAAAAACTAGATCAAACAGATGCTGCAATTAGAAAGCGCAAA
ATAGCTGTATTTAAGTCACAAGGTTACACATCGCTTGGGGGGGGGGCTATGGAGGCAGAA
GGAAGATTTGATGATGCTTTAAACATTTATGATGAGCTTGAAAAACTAGATCAAACTGAT
GCTGCAATAAGAAAGCGCAAAATAGCTGTATTTAAGTCACAAGGTTACACATCGCTTGCA
ATAAAGCATTTAACAATTTACTTGCAATCATTCATGGCCGACCAGGAAGCCTGGATGGAA
CTTGCAGATTTGTATGTAAAAGAAATGGACTATAAAAAAGCTGCATTTTGTGTTGAAGAA
CTTATTTTAAGCAATGCTTTTAATCATCTATACCACCAAAGATACGCAGAAATCATGTAC
ACTATAGGCGGTCAGGAAAATCTTGAGACTGCAAGAAGATACTTTGCTCAAGCTGTTAAA
CTGAGCAGTAACACCAACATTAGAGCATTGTATGGCTTGATGCTGACATCTGGTAGCTCC
ACCCAATCCAGAGGTGACACCAAAGCTCGGAATAGCAAGCAATATGCTAATTGGGCTGGA
AAGATGGTTTTATCTAAGTACAAAAATGTCTGGTCAGAAGGTGGTACTGTGGATGAAACC
AAGTTCTTGCCAAAAATAACCCCAGAAAGTGATCTTCCTCAGCTTACAGCAAGTGTCAGT
CAAATGTTGGGTCAGATAAGCTTAAGTGATGCCTCTTCTTAA

InterProScan

Gene3D	TPR-like_helical_dom_sf (IPR011990) - T[17-290] 1.2E-20
SUPERFAMILY	TPR-like_helical_dom_sf (IPR011990) - T[29-113] 1.93E-5 - T[134-271] 4.78E-12
ProSiteProfiles	TPR-contain_dom (IPR013026) - T[126-265] 10.44

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
EMC2_HUMAN	43.519 %	254	1.92E-83