- Transcript 'Boleac.CG.SB_v3.S596...' >
- Transcript 'KH2012:KH.L170.28.v5...' >
- Transcript 'Boleac.CG.SB_v3.S361...' >
- Transcript 'Harore.CG.MTP2014.S4...' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S283.g06657.01.t
Possible name(s)
TMED3; TMED7; TMED7-TICAM2
Gene model
Location
S283 [51,056 / 52,261]
Amino acid sequence
Length: 192
>Phmamm.CG.MTP2014.S283.g06657.01.p
MNVCLVSCWRSSHFCILSLVISLLFGRTKCVELTFELEDNSKQCFFEDLSKGTKATLEYQ
VISGGRYDVDCYVEDQDGLKLYQEKRKQYDSHEWEATKNTTYQICFSNEFSTITHKVVYF
DFSVGSEKPIVDSMDRATALSLMETACANIHEASNKVMNFQTHFRLRESLSRTFAERLGN
RVQVGVYHNYLN
Nucleotide sequence
Length: 579
>Phmamm.CG.MTP2014.S283.g06657.01.t
ATGAACGTTTGCCTTGTCTCATGTTGGCGAAGCTCGCATTTCTGTATTTTATCCCTAGTC
ATTTCGTTATTATTTGGAAGAACAAAATGCGTTGAACTAACGTTCGAGCTAGAGGACAAT
TCAAAGCAGTGTTTTTTCGAGGATTTGAGCAAAGGCACCAAAGCTACTTTAGAATATCAG
GTCATCAGTGGAGGAAGATATGATGTTGATTGTTATGTGGAGGACCAAGATGGATTAAAA
TTATATCAGGAAAAAAGGAAACAGTATGATTCTCATGAGTGGGAAGCAACCAAGAATACA
ACTTATCAGATATGCTTCAGTAATGAATTTTCCACAATTACACACAAAGTTGTGTATTTT
GACTTCTCAGTTGGTTCAGAAAAGCCAATAGTTGATAGCATGGACAGAGCAACAGCATTA
AGCCTGATGGAAACAGCTTGTGCAAATATCCACGAAGCTTCCAACAAAGTTATGAACTTT
CAAACACACTTCCGTTTGCGTGAGTCATTGTCAAGGACATTTGCAGAGCGCTTAGGAAAC
CGTGTTCAGGTTGGTGTTTACCATAATTATCTCAACTAA
| PANTHER |
TMED7 (IPR015718) - T[12-183] 1.8E-69 |
| PANTHER |
TMP21-related (IPR015720) - T[12-183] 1.8E-69 |
| SMART |
GOLD_dom (IPR009038) - T[32-192] 6.2E-34 |
| Pfam |
GOLD_dom (IPR009038) - T[33-184] 1.7E-31 |
| SUPERFAMILY |
GOLD_dom_sf (IPR036598) - T[41-134] 4.84E-19 |
| ProSiteProfiles |
GOLD_dom (IPR009038) - T[42-124] 19.036 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TMED2_HUMAN | 28.767 % | 77 | 1.09E-17 |
| TMED7_HUMAN | 59.236 % | 202 | 2.34E-66 |
| TMED3_HUMAN | 58.17 % | 187 | 2.78E-60 |