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TRANSCRIPT CARD

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  1. Clone 'cima820032' > 
  2. Clone 'ciem850e07' > 
  3. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S2872.g17193.01.t

Possible name(s)

NLRP14; NLRP5; NLRP8

Gene model

Phmamm.CG.MTP2014.S2872.g17193

Location

S2872 [803 / 2,819]

Sequences

Amino acid sequence

Length: 223

>Phmamm.CG.MTP2014.S2872.g17193.01.p
MKEFLLTYIPFGDEGVSILSSGVGKVAELAMICIGMTSVGAVKLGEHLEMETTQSMVGLD
ISGNEVGDIGACAITKSIKKIKKLEMRRCEITCKGMPGITQNILKSQTKIPCLGLSQNKF
GDDGAQELGKCLHLVEELYLCYCDITSIGADALAGGLSKLKTPIPSLDLSYNKFGDDGTI
KLSKCLHQVKRLYLHGCRITSTGVKALAGGLSTLQAPVSCYKV

Nucleotide sequence

Length: 672

>Phmamm.CG.MTP2014.S2872.g17193.01.t
ATGAAGGAGTTTCTGTTGACTTACATACCTTTTGGAGATGAAGGTGTGAGCATACTAAGC
AGTGGGGTGGGCAAAGTAGCAGAACTTGCTATGATATGCATTGGCATGACATCAGTTGGT
GCTGTTAAGTTGGGTGAACATCTTGAGATGGAAACTACACAGTCCATGGTTGGATTGGAT
ATCAGTGGCAATGAAGTGGGTGACATTGGAGCTTGTGCAATTACCAAGTCAATCAAAAAA
ATAAAAAAGCTTGAAATGCGTCGCTGTGAAATCACATGTAAAGGAATGCCAGGCATCACT
CAAAACATCCTAAAATCTCAAACTAAGATTCCCTGCTTGGGTTTGTCACAGAATAAGTTT
GGTGATGATGGGGCCCAGGAACTTGGAAAATGTTTGCATCTGGTGGAGGAACTTTACTTG
TGTTATTGTGACATCACTTCCATTGGTGCAGATGCATTGGCTGGTGGACTATCCAAGTTA
AAGACACCAATACCGAGCCTGGACTTGTCATACAACAAGTTTGGTGATGATGGGACAATA
AAGCTTTCTAAATGTTTGCATCAAGTGAAGAGACTTTACTTGCATGGATGTAGAATCACG
TCCACTGGAGTAAAAGCATTGGCTGGTGGATTGTCAACACTGCAAGCACCAGTAAGTTGT
TATAAAGTCTGA

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[1-99] 3.1E-8 - T[100-219] 4.6E-25
Pfam
Leu-rich_rpt (IPR001611) - T[59-71] 1.1 - T[113-128] 0.29 - T[166-183] 0.023 - T[189-208] 1.0

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value