- EST 'AHC0AAA225YK03_RM1' >
- Transcript 'Boleac.CG.SB_v3.S23....' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S28.g01136.01.t
Possible name(s)
LRRC24; RTN4R; RTN4RL2
Gene model
Location
S28 [45,389 / 48,569]
Amino acid sequence
Length: 505
>Phmamm.CG.MTP2014.S28.g01136.01.p
MNSMFSTACNVLTVYLLWVPLLLLCRYFLRRIFSARCTLLTFFIPKAFPNLETSCCKMRI
CWCVLAFSYFVLALASKQKCSDCLCKSREVDCGNLQKAPNQLTFPKDKLDYRFEHNGLVS
LDVHSFYLLTNMQWIYLTNNSLTKIPGKTFYKNPDLHAVYLNNNNLTNLPSNLFSKTPNL
QEFYCSDNQITHIDQYVFANLPKLTQLRLANNRLVAVHPMAFSTANALSTLYLEENLLET
AYWTWIANMSLSATSEIELDANRWSCDCRMWPFVHSVTSHKQRLSVVRNSHLSLPMCPGP
DGRKTALTDKTKHDLVCRKAFFNFPLNSSAVSINVDAVEGGNVNLTCSGHGMPIPHLTLF
NEVQQTLITGIGHVCFEIKEVTRDQLGKYKCMMVGTDNKGHDLVVNKTINLRIDSSSKRP
VSVGTILAILLSVIFVIGVASCFWRRQKSRDGYGSLENTGGGAAYYELDESKVPEYQTQA
TPLEEEHLFSDEEVYSKGDDKEVLV
Nucleotide sequence
Length: 1,830
>Phmamm.CG.MTP2014.S28.g01136.01.t
GTAAAGACAGGTTTGTGATTGCGCCGACACAGTGTATTTCACGCATGAACGCCTTGCTGC
CATGCAATAGACCTGATTTATACTTGCTCAGGCTTCTTAAATGAATGGTGTTCGACGAAC
ATGGTTTTGCTTGATAAAGCAAATATGTCATAAAATTATTGGGTTCAAGCTGAAAATGGG
TAATGAATAGTATGTTTAGCACGGCTTGTAACGTTTTAACGGTTTACTTGTTGTGGGTCC
CCTTACTTTTATTGTGCAGATATTTTCTGCGTCGTATTTTTTCAGCCAGATGTACACTTT
TAACATTTTTTATTCCAAAGGCTTTTCCTAACCTTGAAACAAGTTGCTGCAAAATGAGAA
TTTGTTGGTGCGTGTTAGCGTTTTCTTATTTCGTACTGGCATTAGCAAGCAAACAAAAAT
GCTCTGATTGCTTATGCAAATCACGCGAAGTTGATTGTGGAAACCTGCAGAAAGCACCGA
ACCAACTTACGTTTCCGAAAGACAAACTGGATTATCGCTTCGAACATAATGGCTTAGTTT
CGTTGGACGTTCATTCTTTCTATCTTCTTACAAACATGCAGTGGATATATCTTACCAACA
ACAGTCTCACAAAAATACCTGGAAAAACATTTTACAAAAACCCAGATCTACATGCAGTAT
ATTTAAACAACAATAACCTTACAAACTTGCCTTCGAATCTTTTTAGCAAAACGCCAAATC
TTCAAGAATTCTACTGTAGCGACAACCAAATTACTCACATTGATCAGTATGTGTTTGCCA
ACTTACCTAAACTAACACAACTTCGTTTGGCCAACAATCGATTGGTTGCTGTACACCCAA
TGGCATTTAGCACCGCGAATGCTCTATCCACGTTGTATTTGGAAGAAAATCTTCTGGAGA
CTGCGTACTGGACGTGGATTGCAAACATGAGTCTCAGTGCCACTTCAGAGATTGAGCTTG
ATGCAAACAGATGGTCATGTGACTGCAGAATGTGGCCGTTTGTCCACAGCGTGACATCTC
ACAAACAACGACTTAGTGTTGTACGGAATAGCCATTTAAGTTTACCGATGTGCCCTGGTC
CAGATGGGCGAAAAACTGCACTAACAGACAAGACAAAACACGATCTAGTTTGCCGAAAAG
CCTTCTTTAACTTTCCATTAAATTCGTCTGCCGTTTCAATCAATGTCGATGCTGTGGAAG
GTGGAAACGTCAACCTTACTTGTTCCGGCCATGGAATGCCGATTCCCCATCTTACTTTGT
TCAACGAAGTCCAACAAACTTTGATCACAGGCATAGGCCACGTGTGTTTCGAGATCAAGG
AAGTGACTCGTGATCAGCTTGGAAAATATAAATGCATGATGGTAGGAACAGATAACAAAG
GACACGATCTGGTGGTGAACAAAACTATTAATCTTCGCATCGATTCGTCCTCCAAACGCC
CCGTCAGCGTCGGTACAATACTTGCAATCCTGCTGTCCGTAATCTTTGTCATCGGAGTAG
CTTCTTGTTTTTGGAGAAGGCAGAAATCAAGAGATGGTTACGGGTCCTTGGAAAACACTG
GAGGCGGTGCAGCTTACTATGAACTAGATGAATCAAAGGTTCCTGAGTATCAGACACAAG
CCACACCCTTGGAGGAGGAACACCTGTTTTCTGATGAGGAGGTTTATTCAAAAGGCGATG
ATAAGGAGGTTTTGGTTTGAGCCATCAGATGCTCCATGATTCAGAATTTTTCAAATTGCC
CTTTAAGTGCTGTATCTGAATTCTAGAAATTCTTTGTGCTGTTTTTTTATGATCGCGCCA
ACTGTACACGATGAACCTTTCTCTGCCGGC
| Gene3D |
LRR_dom_sf (IPR032675) - T[79-176] 1.1E-13 - T[177-322] 1.4E-24 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[129-152] 1.3 - T[154-176] 18.0 - T[177-200] 58.0 - T[201-224] 0.11 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[155-214] 3.4E-13 |
| Gene3D |
Ig-like_fold (IPR013783) - T[330-401] 8.2E-6 |
| SMART |
Ig_sub (IPR003599) - T[332-406] 0.0077 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[333-393] 5.11E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRC24_HUMAN | 25.806 % | 83.6 | 4.03E-17 |
| R4RL2_HUMAN | 33.333 % | 83.6 | 2.77E-17 |