- Transcript 'KH2012:KH.L18.18.v3....' >
- Transcript 'KH2012:KH.C13.29.v1....' >
- Clone 'cicl053d10' >
- Transcript 'Boleac.CG.SB_v3.S7.g...' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S28.g01139.02.t
Possible name(s)
CARMIL1; CARMIL2; CARMIL3
Gene model
Location
S28 [73,701 / 85,363]
Amino acid sequence
Length: 642
>Phmamm.CG.MTP2014.S28.g01139.02.p
MEADFHFLEIKSMDSPSPDRLVMSTHSSKIFFMQMIGTDDADHIIGRVALSLRTIFPSVP
LSRILKASLEPLHRQKVIQQMLNQADQSEPGPCGNFSEMYRCVCDFLSCPVREEVEWDVD
TIYLSQNCRELSLKDFDLPDASEFAQKLATNMVENKESRIETLDLSNNPLEDKGLIHLSG
ALPVIKHASLTDLNVARTGLTAKGVNGLCQALRSSANIMGSLTHLNLSGNCLKVDDSEGL
YNFLATENHLLELDLSATDSSVEMFFQNTHALKSIDFSGIKFPNEGLKCIMDGLLVNLTK
GLEVSVNLSSCEIKQSGCQVIQSGIGTVRNLVGLDLSDNSMDNELPNFFGWLQQNKSLRE
LKIGRNFSGIKQKNIRPVMDSIVELVQEENSVLESLSLADSKLREYTHVLLGCLGSNTSL
TELDISGNQMGDTGARVLAKSVQINSKLKILKFDRNNLSAAGFHELAVAMGKNYTLRYMP
YPVNDCMGAMKQHPERTQTALAQIQDLLLRNANTNRASNDQQFRLQKVVTSTAQQVLDKV
AEKVDDVINALEIIDAESENASCVIVGKKLVRDAKNSKELLSDIYGLGMEKSAGPSSQLQ
CKISEMATNVDKMVQEHIKSTVDAMTKNAESQCPQIYEVRKC
Nucleotide sequence
Length: 1,929
>Phmamm.CG.MTP2014.S28.g01139.02.t
ATGGAAGCAGACTTCCACTTCCTTGAAATCAAATCCATGGATAGTCCATCTCCTGACAGG
CTTGTCATGTCAACTCACAGTTCAAAAATATTTTTCATGCAAATGATTGGGACTGACGAT
GCAGACCATATCATTGGGAGAGTAGCATTGTCACTTCGAACCATTTTTCCAAGTGTTCCT
CTGTCACGTATTCTGAAGGCTTCACTGGAACCACTACATCGTCAGAAAGTCATTCAACAA
ATGCTAAACCAGGCTGACCAGTCAGAACCAGGCCCATGTGGCAATTTTTCTGAGATGTAT
CGTTGTGTTTGTGATTTCCTTTCTTGTCCTGTTAGGGAGGAAGTGGAATGGGATGTAGAC
ACCATATACCTCTCTCAAAATTGCCGTGAGCTCAGTTTAAAGGATTTTGACTTGCCAGAT
GCAAGTGAATTTGCTCAGAAGTTGGCAACTAACATGGTTGAAAACAAGGAGAGCAGGATC
GAGACGTTGGATCTATCCAACAATCCTCTGGAGGACAAAGGACTGATCCACCTCAGTGGT
GCACTTCCTGTGATTAAACATGCCAGTTTAACAGACCTTAATGTAGCTCGCACAGGCCTT
ACTGCAAAAGGTGTAAATGGTTTATGCCAAGCACTCAGGTCAAGTGCAAATATTATGGGG
AGTTTAACTCATCTCAACTTGTCTGGAAACTGCCTAAAGGTTGATGATTCAGAGGGACTT
TACAACTTTTTGGCCACCGAAAATCACCTTCTGGAGCTTGACCTTTCAGCCACCGACAGT
TCTGTGGAAATGTTCTTTCAAAACACCCATGCATTGAAGTCCATTGACTTTTCTGGCATC
AAATTTCCAAATGAAGGGCTAAAGTGCATTATGGATGGTTTGCTTGTCAATTTAACAAAA
GGTCTTGAAGTTTCAGTTAACTTATCAAGCTGTGAGATCAAGCAGTCTGGCTGTCAGGTG
ATCCAATCTGGAATTGGTACAGTCCGCAATCTGGTGGGTCTGGATCTCTCTGACAATTCT
ATGGACAACGAACTTCCTAACTTTTTTGGCTGGTTGCAGCAAAACAAATCACTCCGTGAA
TTGAAGATTGGCCGAAACTTCTCAGGGATTAAACAGAAAAACATAAGGCCAGTGATGGAC
AGCATCGTTGAGCTGGTTCAAGAAGAAAACTCGGTTTTGGAATCCCTCTCCCTGGCTGAT
TCGAAGTTGCGAGAATACACACATGTGCTGCTGGGATGTCTTGGTAGTAATACCTCACTG
ACGGAACTCGACATAAGTGGAAATCAGATGGGAGACACTGGTGCCAGAGTTCTCGCCAAA
TCCGTTCAGATCAACTCGAAACTAAAAATTCTCAAGTTTGACCGGAACAATCTTTCAGCT
GCAGGTTTTCATGAACTTGCTGTTGCCATGGGGAAAAACTATACACTGAGGTACATGCCG
TACCCGGTCAACGACTGCATGGGAGCGATGAAGCAGCACCCGGAAAGGACTCAAACTGCT
TTGGCTCAAATACAAGATCTTCTATTGCGAAATGCCAACACCAACAGAGCGAGCAACGAC
CAACAGTTCAGACTACAAAAGGTCGTCACTTCAACTGCACAACAAGTTCTAGACAAGGTG
GCAGAAAAAGTTGATGACGTGATTAACGCCTTGGAGATTATCGATGCCGAATCAGAGAAC
GCCAGTTGCGTCATAGTTGGCAAGAAATTGGTCAGAGACGCGAAAAACTCCAAAGAGCTT
TTGTCAGATATATACGGTCTTGGCATGGAAAAATCTGCCGGGCCCAGCAGTCAGTTACAA
TGCAAAATATCTGAGATGGCAACGAACGTGGACAAAATGGTGCAAGAGCACATCAAGAGT
ACTGTTGATGCGATGACCAAGAATGCTGAGTCCCAGTGTCCACAAATATACGAGGTACGC
AAGTGTTGA
| Gene3D |
PH-like_dom_sf (IPR011993) - T[1-52] 3.0E-6 |
| PANTHER |
CARMIL1 (IPR029764) - T[2-137] 6.0E-177 - T[143-264] 6.0E-177 - T[260-637] 6.0E-177 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[119-261] 3.3E-18 - T[262-511] 8.6E-68 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[160-179] 0.026 - T[221-233] 1.4 - T[416-439] 7.0E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CARL1_HUMAN | 37.973 % | 472 | 1.42E-151 |
| CARL3_HUMAN | 30.959 % | 342 | 2.59E-103 |
| CARL2_HUMAN | 30.508 % | 216 | 1.16E-59 |