Aniseed - Transcript Card

Region 'REG00000212' >
Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S292.g06800.02.t

Possible name(s)

CASKIN1; MIB1; MIB2

Gene model

Phmamm.CG.MTP2014.S292.g06800

Location

S292 [37,865 / 45,924]

Sequences

Amino acid sequence

Length: 355

>Phmamm.CG.MTP2014.S292.g06800.02.p
GIKHPERRCDACKKFGIRGTRWQCTECPNCDLCTRCYMTNKHNIHHKFKRYDNCRSIGRN
LSARHGQSQLQSLGLYKGARVVRGYHWEWGDQDGGKNRSGIITHLCEVSPDDGNTAASVT
WDCGRTNRYRVGHKGKVDLRYLSPGRGIPYYKDHLMACHASRTSSFEAQSTSSSPFKVGD
PVTVTLSVDILRPMLENHGGWSSDMEELIGKKGHVHRITTNNDVRVQFRPADLGARLSTR
SPQKCRWTFHPGALNPVTENSSAATASTSSSPSNTLAEAAMQIGPSSSRDIAATNDIFSH
LSPKIVQLSDVSSSPLHEHDDVMDCVEGTSRRKEFDDISAVTKRVSTTHFSDDGT

Nucleotide sequence

Length: 1,068

>Phmamm.CG.MTP2014.S292.g06800.02.t
AGGCATCAAACATCCTGAACGAAGATGCGACGCTTGTAAGAAATTCGGCATCAGGGGAAC
CAGATGGCAATGCACGGAATGCCCGAATTGCGATCTATGTACCAGATGTTATATGACAAA
CAAACACAATATACACCACAAGTTCAAACGTTACGACAACTGTCGGTCTATCGGGAGAAA
CCTCTCTGCCCGACACGGCCAATCGCAATTACAAAGCCTTGGACTGTACAAGGGCGCAAG
AGTCGTCAGGGGTTACCACTGGGAGTGGGGTGACCAGGACGGGGGCAAAAATCGCAGCGG
GATCATCACCCACCTGTGCGAAGTTTCTCCAGACGATGGAAACACGGCTGCTTCGGTTAC
TTGGGATTGTGGGAGGACGAACAGATACCGCGTTGGACACAAGGGAAAAGTCGATCTTCG
CTATTTGTCTCCGGGCAGGGGAATTCCGTATTACAAGGACCATCTTATGGCCTGTCATGC
TTCCCGCACTTCGTCTTTCGAAGCTCAATCTACTTCCAGCTCCCCGTTTAAAGTAGGCGA
CCCTGTAACGGTTACGTTATCTGTCGACATTTTAAGACCGATGCTAGAGAACCACGGAGG
ATGGAGTAGTGATATGGAAGAGCTGATTGGCAAAAAAGGTCACGTGCACAGAATCACAAC
AAACAATGACGTCAGGGTTCAATTTAGACCAGCTGATCTTGGAGCTCGTCTAAGTACTCG
GAGTCCACAAAAATGCCGCTGGACATTTCACCCTGGTGCCCTAAATCCTGTCACGGAAAA
CTCAAGCGCTGCCACGGCATCAACGTCATCATCACCTTCTAACACACTTGCGGAGGCAGC
GATGCAAATCGGCCCAAGTTCGTCACGTGACATCGCTGCAACAAATGATATATTTTCTCA
TCTCAGTCCAAAGATTGTTCAACTTTCCGACGTTTCTTCGTCCCCTTTACATGAACATGA
TGACGTCATGGATTGCGTGGAAGGGACTTCTCGGCGGAAAGAATTTGATGACATCAGTGC
AGTTACCAAAAGAGTCTCTACTACGCATTTCTCCGATGATGGTACCCT

InterProScan

SMART	Znf_ZZ (IPR000433) - T[3-48] 4.0E-7
ProSiteProfiles	Znf_ZZ (IPR000433) - T[3-50] 12.039
Pfam	Znf_ZZ (IPR000433) - T[4-45] 5.7E-8
Gene3D	Mib_Herc2_sf (IPR037252) - T[62-147] 2.1E-22
ProSiteProfiles	Mib_Herc2 (IPR010606) - T[67-145] 26.649
SUPERFAMILY	Mib_Herc2_sf (IPR037252) - T[71-143] 2.35E-19
Pfam	Mib_Herc2 (IPR010606) - T[78-142] 7.0E-22

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MIB2_HUMAN	46.667 %	233	4.25E-69
MIB1_HUMAN	35.145 %	172	1.29E-47