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TRANSCRIPT CARD

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  1. Clone 'citb9i9' > 
  2. Transcript 'KH2012:KH.C12.68.v1....' > 
  3. Clone 'cien97189' > 
  4. Transcript 'KH2012:KH.L116.81.v1...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S296.g06860.01.t

Possible name(s)

ANGPTL1; FGL2; FIBCD1

Gene model

Phmamm.CG.MTP2014.S296.g06860

Location

S296 [14,232 / 15,436]

Sequences

Amino acid sequence

Length: 151

>Phmamm.CG.MTP2014.S296.g06860.01.p
MVLFFLQVFQKRFDGSVNFSRNWQEYKDGFGDIRGEFWLGLDKIHMMTSGRNCSLRIDLT
GFDDSTAYAQYTSFAIDDESDNYRLQVSGYSGTADILQPSAYSTGEIPAGGGLMIVLILN
STLNGEDQKDKTTTWSGKPGKGGMKRLKSQQ

Nucleotide sequence

Length: 456

>Phmamm.CG.MTP2014.S296.g06860.01.t
ATGGTCTTATTTTTTCTACAGGTTTTTCAAAAACGATTTGACGGAAGTGTGAATTTTAGC
AGAAACTGGCAGGAATATAAAGATGGATTCGGAGACATTCGGGGCGAATTTTGGCTAGGG
TTGGACAAAATACACATGATGACAAGCGGACGGAATTGCAGCTTGAGAATTGATTTAACA
GGATTTGATGACTCTACAGCTTACGCACAATACACTTCGTTTGCAATCGACGACGAATCA
GACAATTATCGTTTACAAGTTTCTGGATACAGCGGAACGGCAGACATCCTTCAACCATCT
GCGTACTCCACTGGGGAAATTCCGGCGGGTGGTGGTTTAATGATTGTTTTGATTCTAAAC
TCAACGCTGAATGGGGAAGATCAGAAGGACAAAACCACAACATGGTCTGGAAAACCTGGA
AAGGGTGGGATGAAGCGATTAAAGAGTCAACAATGA

InterProScan

SMART
Fibrinogen_a/b/g_C_dom (IPR002181) - T[1-149] 4.7E-12
ProSiteProfiles
Fibrinogen_a/b/g_C_dom (IPR002181) - T[1-94] 23.652
Gene3D
Fibrinogen_a/b/g_C_1 (IPR014716) - T[6-104] 1.3E-42
SUPERFAMILY
Fibrinogen-like_C (IPR036056) - T[8-103] 1.44E-39
Pfam
Fibrinogen_a/b/g_C_dom (IPR002181) - T[8-97] 1.5E-33

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ANGL1_HUMAN 51.724 % 99.8 2.66E-25
FBCD1_HUMAN 52.174 % 98.2 9.0E-25
FGL2_HUMAN 52.874 % 99.4 3.1E-25