- Transcript 'KH2012:KH.C3.616.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S297.g06884.01.t
Possible name(s)
OPN1LW; OPN1MW2; OPN1MW3
Gene model
Location
S297 [110,055 / 113,942]
Amino acid sequence
Length: 391
>Phmamm.CG.MTP2014.S297.g06884.01.p
MNHWLESIINERKFDLLNQSLTGGVENNGLLPETSLVVPEESIDTTIPQCKDLNPYVLKG
DGWIPQHIVRAERSVYSFLAVYMTFVTLLGVSTNAVVIIATLKNRVLRQPLNYIIVNLAV
ADLLSALFGGVISVMANGAGYFFWGKTMCQVEGYVVSNFGVTGLNCIAVMAFERYFVICK
PFGPVRFEDKHAYIGIASTWIWAIIWNTPPLIWWDGYDPEGLGTSCAPNWFVKGYRERMF
IILYFVFCFLIPLLIIVLCYGKLIWTLRQIAKESSLAGSTSPEAEVTKMVVTMVAAFVLC
WLPYASFAMYNVVNPDAQIDYSLGAAPAFFAKTATIYNPLIYIGLNRQFRDCVIRMFFGG
RNPWSDELATSQVSSQGSQMTTVSSNKVGPA
Nucleotide sequence
Length: 1,176
>Phmamm.CG.MTP2014.S297.g06884.01.t
ATGAATCACTGGCTTGAAAGTATTATCAATGAGCGAAAGTTTGATTTGCTAAATCAATCT
CTCACAGGCGGTGTCGAGAACAATGGCTTGTTACCGGAAACGAGTCTGGTTGTTCCGGAA
GAAAGTATTGACACCACCATTCCGCAATGCAAGGACCTCAATCCATACGTGTTAAAGGGA
GATGGATGGATCCCGCAACATATCGTGAGAGCGGAGCGCAGTGTTTACAGCTTTCTTGCC
GTATACATGACTTTCGTAACACTTCTTGGGGTCTCTACCAACGCCGTCGTTATTATTGCA
ACTTTAAAAAACAGGGTTTTGCGTCAACCTCTCAACTACATCATTGTGAACTTGGCCGTG
GCCGATCTGCTAAGTGCATTGTTCGGAGGAGTAATCAGTGTCATGGCTAATGGTGCTGGC
TACTTCTTCTGGGGAAAGACAATGTGTCAAGTTGAAGGCTACGTGGTGTCTAATTTCGGT
GTTACCGGCCTCAACTGCATTGCTGTAATGGCATTCGAAAGATACTTTGTCATTTGCAAG
CCATTTGGTCCAGTCAGATTTGAAGACAAGCATGCGTATATTGGTATCGCCTCAACATGG
ATTTGGGCAATTATTTGGAACACACCTCCACTTATTTGGTGGGACGGATATGACCCCGAA
GGACTTGGTACCAGTTGTGCTCCAAACTGGTTTGTTAAAGGATACAGGGAGCGAATGTTT
ATTATTCTCTACTTCGTCTTCTGCTTCCTTATTCCGCTTCTCATCATTGTCCTCTGCTAC
GGAAAACTGATTTGGACTCTTCGCCAGATTGCCAAAGAAAGTTCCCTTGCAGGAAGCACA
AGCCCTGAAGCCGAAGTAACAAAGATGGTGGTGACTATGGTGGCAGCTTTTGTGTTATGT
TGGCTTCCCTACGCTTCATTTGCCATGTACAATGTTGTTAACCCTGATGCACAGATCGAC
TATTCACTTGGTGCTGCTCCGGCCTTCTTTGCAAAGACTGCGACAATATACAACCCTCTT
ATATACATCGGTCTGAATCGACAGTTTCGCGATTGTGTGATTCGGATGTTCTTCGGTGGA
CGCAATCCATGGAGTGACGAGTTGGCAACGAGCCAGGTCAGCTCACAGGGATCTCAGATG
ACAACTGTCAGTAGCAACAAAGTTGGACCGGCATAA
| PRINTS |
GPCR_Rhodpsn (IPR000276) - T[78-102] 2.5E-38 - T[111-132] 2.5E-38 - T[156-178] 2.5E-38 - T[191-212] 2.5E-38 - T[241-264] 2.5E-38 - T[286-310] 2.5E-38 - T[324-350] 2.5E-38 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[93-342] 9.0E-43 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[93-342] 36.881 |
| ProSitePatterns |
GPCR_Rhodpsn (IPR000276) - T[162-178] . |
| ProSitePatterns |
Retinal_BS (IPR027430) - T[326-342] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| OPSR_HUMAN | 45.862 % | 264 | 9.95E-86 |
| OPSG3_HUMAN | 47.931 % | 262 | 7.49E-85 |
| OPSG_HUMAN | 47.931 % | 262 | 7.49E-85 |