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- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S2983.g17325.01.t
Possible name(s)
Phmamm.CG.MTP2014.S2983.g17325
Gene model
Location
S2983 [7,071 / 9,690]
Amino acid sequence
Length: 872
>Phmamm.CG.MTP2014.S2983.g17325.01.p
MVQFACKTPLGRPPTRRKPWRTELIKPVSEMLKYLESDENLKNGYHLADILTKTCFVAGD
HEIYDKFQDGVKEALKSPSAKKDLYDQIEEDSEIYDFQSLCYAFTRQEKINLKKTIYRST
SLFVTALIRANKIEADSTFDAIDKLPEEIEDKIPRHDIKYMLALACEVRIKAYTSANAQV
DWHPNVFPKENNNNQASGSAFIDILGLDDSVKMILTAVKLQEIALHNLGVSLNKNDNGDN
EEDGIDKESKELLNKGCLLLVLKKHKESLSCFDELQKLDCFELNQDKKGNLSIKEMHFIY
VGINYCKNNQFDHLEELCAANENNRASPTSKYYQHIFNGVIFYHKRCYRQALMHFEKAEQ
LNNEFDSDEDSIKGQVRCLCKLGLLNEALDCCNLTLKTQRHPHVLLRAAKCCEIAEALEL
RKEALQILRKENTSCDETLANLLFSISSNLMNLNDKKYTSYLKDELDVRNKVLREKMDKE
EQIRIQYGIAECQNQLQQHDVSKESYQKTIDLIVSNKNHSNKEELSVENCHMLAECYKQL
EKHGDAVEYFKAETNLMKEKNQHWKKIVKRKKVLKNYLFLQRQDAQADEQLQEVKNLLED
CLKEESDPELKVDLLFGLGCCCFDLQDYQTALPPPQCCEITEALNLREEALKILRKENTC
CDETLADLLFDISSDLMNINDKEYTSYLEDELVIRKKMLTEDIGEESHIHYEIAECQSQL
QQHDESKQSYQKTIDLLLSNKNHSNKKEISAVNHNILAQCYKQLEKHDDAVEHFKAEINL
MKEKNQHWKKIVKNKKDLKYYLFSQGQEAQADEQLQEVKNLLEECLKDESDPELKFDLLF
DLGCCYFDLQDYQTALDTFQDETFQPPPQLYN
Nucleotide sequence
Length: 2,619
>Phmamm.CG.MTP2014.S2983.g17325.01.t
ATGGTTCAATTTGCCTGTAAAACTCCATTGGGAAGGCCACCAACCAGACGCAAGCCTTGG
AGAACAGAGTTAATTAAACCAGTGAGTGAAATGCTGAAATATCTTGAAAGTGATGAAAAC
CTCAAGAATGGCTACCACCTTGCTGATATTCTGACCAAAACTTGTTTTGTGGCTGGAGAC
CATGAAATATATGACAAGTTTCAAGATGGAGTAAAAGAAGCGTTGAAATCCCCTAGTGCT
AAAAAAGATTTGTATGATCAAATAGAAGAAGATTCTGAAATCTATGATTTTCAATCACTG
TGTTATGCATTTACAAGACAGGAAAAAATTAATTTGAAGAAAACAATTTATCGAAGCACA
AGTTTATTTGTTACTGCATTAATCCGAGCTAATAAGATTGAAGCAGATTCAACCTTTGAT
GCAATTGATAAACTTCCTGAAGAAATAGAAGATAAAATCCCAAGGCATGATATCAAATAC
ATGCTTGCACTGGCATGTGAAGTTAGAATAAAAGCTTACACATCAGCAAATGCCCAGGTT
GATTGGCATCCTAATGTTTTTCCCAAAGAAAACAACAACAACCAAGCCAGTGGTTCAGCA
TTTATAGATATACTTGGGTTAGATGACTCAGTCAAAATGATCTTGACTGCTGTAAAGCTA
CAAGAAATTGCCCTACACAATCTTGGTGTGTCTCTGAATAAAAATGATAATGGTGATAAT
GAAGAAGATGGAATTGACAAGGAATCTAAGGAATTGTTAAATAAAGGTTGTCTTTTGCTT
GTATTAAAGAAGCATAAAGAATCTTTGAGTTGTTTTGATGAACTGCAAAAATTAGATTGT
TTTGAGCTTAATCAGGACAAAAAAGGAAATTTGTCAATTAAGGAAATGCATTTTATCTAT
GTAGGGATTAATTACTGTAAAAACAATCAATTTGATCATCTTGAGGAGCTTTGTGCAGCA
AATGAAAATAACCGTGCCTCACCCACATCAAAATATTACCAGCATATTTTCAATGGTGTT
ATCTTCTATCATAAGCGATGTTACAGACAAGCATTGATGCACTTTGAAAAAGCTGAACAA
CTTAATAATGAATTTGATTCTGATGAAGACTCCATAAAAGGACAGGTCAGATGCCTTTGC
AAACTTGGTTTGTTGAATGAGGCACTGGATTGCTGTAACTTAACACTTAAAACTCAGAGG
CATCCCCATGTTTTGCTTAGAGCTGCGAAATGCTGTGAAATAGCTGAAGCATTAGAATTA
AGGAAAGAGGCATTACAGATTTTAAGAAAAGAAAATACGAGCTGTGATGAGACCTTAGCC
AATTTACTTTTTTCCATTTCATCAAATTTAATGAACTTAAATGACAAGAAATATACAAGC
TATCTTAAAGATGAGTTGGATGTTAGAAATAAAGTATTAAGGGAGAAAATGGATAAAGAA
GAACAAATTCGCATTCAGTATGGAATAGCAGAATGTCAAAACCAGCTTCAACAACATGAT
GTGTCTAAAGAAAGTTATCAAAAAACAATCGACCTGATAGTGAGTAACAAAAATCATTCA
AATAAAGAGGAATTATCTGTCGAGAACTGCCACATGTTAGCTGAATGTTATAAGCAACTA
GAAAAACATGGTGATGCTGTTGAATATTTCAAAGCTGAAACAAACCTGATGAAAGAAAAA
AATCAGCACTGGAAAAAAATAGTAAAGAGAAAAAAAGTTTTAAAAAACTACTTATTTTTA
CAAAGACAAGATGCACAAGCTGATGAACAATTACAGGAGGTTAAAAACTTGTTGGAAGAC
TGTTTGAAAGAGGAGTCTGACCCTGAGCTAAAAGTTGATTTGTTGTTTGGCCTTGGTTGC
TGTTGTTTTGACCTTCAAGATTATCAAACAGCCCTGCCCCCCCCCCAATGCTGTGAAATA
ACAGAGGCATTAAATTTGAGAGAAGAGGCATTGAAGATTTTAAGAAAAGAAAATACATGC
TGTGATGAGACTTTAGCAGATTTACTTTTTGACATTTCATCTGATTTAATGAACATAAAT
GACAAGGAATATACAAGCTATCTTGAAGATGAGCTGGTTATTAGAAAAAAAATGTTGACA
GAGGATATAGGGGAAGAGAGTCACATTCATTATGAAATAGCAGAATGTCAAAGTCAGCTT
CAACAACACGATGAGTCCAAACAAAGTTATCAAAAAACTATCGACCTACTATTGAGCAAC
AAAAATCATTCAAATAAAAAAGAAATATCTGCTGTTAACCACAACATATTGGCGCAATGT
TATAAGCAACTAGAAAAACATGATGATGCTGTTGAACATTTCAAAGCTGAAATAAACCTG
ATGAAAGAAAAAAATCAGCACTGGAAAAAAATAGTAAAGAATAAAAAAGATTTAAAATAC
TACTTATTTTCACAAGGACAAGAAGCACAAGCAGATGAACAATTACAGGAGGTTAAAAAC
TTGTTGGAAGAATGTTTGAAAGATGAGTCTGACCCTGAGCTAAAATTTGACTTGTTGTTT
GACCTTGGTTGCTGTTATTTTGACCTTCAAGATTATCAAACAGCCCTGGATACATTTCAA
GATGAAACATTTCAACCCCCCCCCCAACTGTATAATTAG
| SMART |
TPR_repeat (IPR019734) - T[249-282] 79.0 - T[332-365] 10.0 - T[369-402] 240.0 - T[483-516] 53.0 - T[527-560] 290.0 - T[707-740] 8.0 - T[751-784] 36.0 - T[836-864] 130.0 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[334-447] 2.9E-7 - T[461-634] 2.9E-9 - T[685-791] 3.8E-7 - T[792-861] 1.8E-5 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[334-632] 6.45E-8 - T[707-857] 2.95E-11 |
| Pfam |
TPR_repeat (IPR019734) - T[528-551] 0.13 |
| Pfam |
TPR-3 (IPR011716) - T[839-860] 0.23 |
| Protein Name | Identity | Bit Score | e-value |
|---|