Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S2992.g17335.03.t

Possible name(s)

HMCES

Gene model

Phmamm.CG.MTP2014.S2992.g17335

Location

S2992 [328 / 2,671]

Sequences

Amino acid sequence

Length: 337

>Phmamm.CG.MTP2014.S2992.g17335.03.p
MCGRTACTLNPDDVSRSCRYKRKNGCKKNPKWVKNKDKYYPSHNKAPQSYSPILLNGNHF
LNAGNDCPYVSGDDERVLCAMRWGLIPKWFKGGNVDKVNYSMNNARSDTMLEKKSYKIPL
QKGQRCVLVVEGFYEWHTSSAGKQPYYIYFPDKDSDEPSSDPEDDQNENQPPTRLITMAG
IFEKTLYENEDFYSFTVITVDADPSFSWLHHRMPAVLANDDEIDKWLDYENVPLDKALEL
IKPKNCLKWHPVSSFVNNSRNHGPECWKEINLDEIKTSTPTKYKQESKSMMQWLSTAKSS
PSKQASVEQPSPSKAKHKVTAGAMDRFVKKAKRESHE

Nucleotide sequence

Length: 1,014

>Phmamm.CG.MTP2014.S2992.g17335.03.t
ATGTGTGGTAGAACAGCCTGTACACTGAATCCTGATGATGTGAGCAGATCATGCAGGTAC
AAGAGAAAAAATGGATGTAAGAAAAACCCAAAATGGGTGAAGAATAAGGATAAGTATTAC
CCGAGCCATAACAAGGCACCCCAATCATATAGCCCTATTTTATTAAATGGTAATCATTTT
TTAAATGCTGGAAATGACTGTCCATATGTCAGTGGTGATGATGAAAGGGTTCTGTGTGCT
ATGCGATGGGGATTAATACCAAAGTGGTTTAAAGGAGGAAATGTGGACAAAGTAAACTAC
AGTATGAACAATGCCAGAAGTGATACTATGTTGGAAAAAAAATCATACAAAATCCCTTTG
CAGAAGGGCCAGAGGTGTGTTTTGGTTGTTGAAGGTTTTTATGAATGGCACACCTCTTCT
GCGGGAAAGCAACCATACTACATCTACTTCCCTGACAAAGATTCTGATGAGCCCAGCTCA
GACCCAGAAGATGACCAGAATGAAAACCAACCTCCAACCCGCTTAATCACCATGGCTGGC
ATTTTTGAAAAAACTCTTTACGAAAATGAGGATTTCTATTCATTTACAGTAATCACAGTT
GATGCCGATCCAAGCTTTTCCTGGCTACATCATAGAATGCCTGCAGTTCTTGCAAATGAC
GATGAGATCGATAAATGGTTGGATTATGAAAATGTGCCATTGGACAAAGCTCTGGAGTTG
ATAAAACCAAAAAATTGTTTAAAATGGCATCCAGTCTCTAGTTTTGTAAATAACTCTAGA
AACCACGGACCTGAGTGTTGGAAAGAAATCAACTTGGATGAAATTAAAACTTCAACACCA
ACAAAATACAAGCAAGAGAGCAAGTCAATGATGCAATGGCTGTCAACTGCAAAATCCTCG
CCATCCAAACAAGCATCCGTTGAGCAACCCTCACCATCCAAAGCAAAGCACAAGGTCACT
GCTGGTGCTATGGATAGATTTGTTAAAAAGGCCAAACGAGAAAGCCATGAATGA

InterProScan

Gene3D	SRAP-like (IPR036590) - T[1-277] 1.0E-91
PANTHER	SRAP (IPR003738) - T[1-318] 5.4E-85
Pfam	SRAP (IPR003738) - T[1-258] 3.3E-62
SUPERFAMILY	SRAP-like (IPR036590) - T[2-270] 5.76E-55

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
HMCES_HUMAN	39.058 %	252	5.79E-82