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  1. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S299.g06914.01.t

Possible name(s)

PTGR1; PTGR2; ZADH2

Gene model

Phmamm.CG.MTP2014.S299.g06914

Location

S299 [92,835 / 95,201]

Sequences

Amino acid sequence

Length: 308

>Phmamm.CG.MTP2014.S299.g06914.01.p
MVKSKVYVKAQEFVGNPKEEDFKIIEQDVDENLKDEEILTEAVCISPDPYIRVLKSKNSK
YPTGSMVLQEIGWRTISKSKGEAVWYRCDDICPDQPISVATGALGMPGVTAHYGLTTICK
PKAGETVMVSGAAGAVGSIVGQISKILGCRAIGSCGSDEKVEFAKSLGFDAVFNYKTQDW
KTALKEAAPNGIDCYYDNVGGKMSSAVIEQMNIGGRIAVCGAVSAYNSEEVPQAPVVQLH
FVFKCLTMTGLQVFNLQDKKGTYDILNQWIKEGKIKTRETVTNGFENVPKAFMSMLKGGN
IGKAVVML

Nucleotide sequence

Length: 927

>Phmamm.CG.MTP2014.S299.g06914.01.t
ATGGTCAAGTCAAAGGTGTACGTAAAAGCTCAAGAGTTCGTTGGAAATCCCAAGGAAGAA
GATTTTAAAATCATTGAGCAAGATGTGGACGAAAATCTCAAAGACGAAGAGATTCTTACG
GAAGCGGTATGCATCAGCCCCGACCCATACATCCGGGTGCTAAAAAGCAAAAACTCAAAA
TACCCGACTGGGTCGATGGTATTGCAGGAAATCGGCTGGAGAACGATCAGCAAAAGCAAA
GGGGAGGCTGTGTGGTATCGTTGCGATGATATATGCCCAGATCAACCGATATCAGTTGCA
ACTGGTGCCTTGGGAATGCCAGGTGTAACAGCACATTATGGTTTGACTACTATCTGCAAG
CCCAAAGCTGGTGAAACTGTAATGGTTTCCGGGGCAGCTGGTGCTGTCGGAAGCATTGTC
GGCCAGATCTCTAAGATATTGGGATGCAGAGCTATTGGAAGTTGCGGATCCGACGAGAAA
GTCGAATTTGCAAAGTCGCTTGGTTTTGATGCGGTTTTCAATTACAAGACCCAGGACTGG
AAAACTGCTCTCAAAGAGGCAGCACCCAACGGAATCGATTGCTACTACGACAATGTGGGT
GGCAAAATGTCTTCAGCGGTTATTGAACAAATGAACATCGGCGGAAGAATTGCAGTTTGT
GGTGCGGTTTCGGCTTATAATAGCGAAGAAGTACCTCAAGCTCCAGTGGTGCAACTGCAC
TTTGTATTCAAATGCTTGACAATGACAGGTCTTCAAGTATTCAACCTTCAGGATAAAAAA
GGAACTTACGACATTCTTAACCAGTGGATTAAGGAAGGCAAGATCAAGACGCGGGAAACT
GTAACAAATGGATTTGAAAATGTCCCGAAGGCATTTATGTCTATGCTGAAAGGTGGAAAC
ATCGGCAAAGCGGTTGTAATGCTCTAA

InterProScan

SUPERFAMILY
GroES-like_sf (IPR011032) - T[1-120] 4.39E-15 - T[247-306] 1.37E-6
CDD
PTGR1 (IPR014190) - T[2-306] 3.69126E-150
SMART
PKS_ER (IPR020843) - T[66-306] 1.8E-4
SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[101-258] 5.77E-49
Pfam
ADH_C (IPR013149) - T[135-259] 1.4E-22

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PTGR3_HUMAN 32.71 % 95.5 2.81E-22
PTGR1_HUMAN 43.161 % 262 1.18E-86
PTGR2_HUMAN 35.866 % 183 1.8E-55